Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_70200 |
Symbol | |
ID | 4384019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6259725 |
End bp | 6261305 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639328257 |
Product | putative binding protein component of ABC dipeptide transporter |
Protein accession | YP_793791 |
Protein GI | 116053464 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCG CCGCTTTCTC CCTGTTCCTC GCCCCCCTGC TGCTCGCCCA GCCCGCCGCC GCTGCCACCT TGAGTGTGTG TACCGAGGCC AGCCCCGAGG GCTTCGACGT GGTCCAGTAC AACTCGCTGA CCACCACCAA CGCCTCGGCC GATGTGCTGA TGAATCGCCT GGTCGAGTTC GACGCCGGCA AGGGGACGGT GGTGCCCTCG CTGGCCGAGC GCTGGTCGGT GTCCGACGAC GGCCTGAGCT ATCGCTTCGA CCTGCGCCAG GGCGTGCACT TCCACAGCAC CGCCTACTTC AAGCCGAGCC GTACGCTCGA CGCCGACGAC GTGGTGTTCA GCTTCCAGCG CATGCTCGAT CCGGCCAATC CCTGGCACAA GGTGGCGCAG AACGGCTTCC CGCACGCCCA GTCGATGCAA CTACCGGAGC TGATCAAGCG GGTGGAGAAA AGCGGCGACC ACCAGGTGCT GATCGTTCTC GACCACCCCG ACGCGACCTT CCTGCCGATG CTGAGCATGG GCTTCGCCTC CATCTATTCG GCGGAGTACG CCGACCAGTT GATGAAGGCC GGAACCCCGG AAAAGCTCAA CACCGCGCCG ATCGGCAGCG GGCCGTTCGT GTTCAAGCGC TTCCAGAAGG ACGCGGTGGT GCGCTACGCC GCCAACCCCG AGTACTTCGC CGGCAAGCCG GCGGTCGACG CGCTGATCTT CGCCATTACC CCGGACGCCA ACGTGCGCCT GCAGAAGTTG CGCCGCGGCG AATGCCAGAT CGCCCTGTCG CCGAAGCCGC TGGACGTGGA GAGCGCGCGC AAGGACGCCA GCCTGAAGGT CGAGCAGACG CCGGCCTTCA TGACCGCCTT CGTCGCCCTC AATACCCAGC ATCCGCCGCT GGACGATCCC AAGGTGCGCC AGGCGATCAA CCTGGCCTTC GACCGCACCA GCTACCTGCA GGCGGTATTC GAAGGCAGCG CCAGTGCCGC CACCGGCATC TATCCGCCAA ACACCTGGAG CTATGCCAGG GATATTCCCG CCTACCCGCA CGACCCCGAA CAGGCGCGCA AGCTGCTGGC TGGCAAGCAG CTTCCCGAGC TGAACATCTG GACCCGCCCG TCCGGCAGCC TGCTCAACCC CAACCCGAGC CTCGGCGCCC AACTGCTCCA GGCCGACCTG GCGGAGGCCG GGATCAAGGC CAACATCCGC GTCATCGAAT GGGGCGAGTT GATCCGTCGC GCCAAGAACG GCGAACACGA CCTGCTGTTC ATGGGTTGGG CCGGCGACAA CGGCGATCCG GACAACTTCC TCACTCCGCA ATTCAGCTGC GCCAGCGTCA AGTCGGGGCT CAACTTCGCG CGCTATTGCG ACCCCGGCCT GGACAAGCTG ATTGCCGACG GCAAGGCCGC CAGCAGCCAG GAACAACGCA CCGGCCTGTA CCACCAGGCG CAGAAACTGA TCCACGAACA GGCGCTCTGG CTGCCCCTGG CCCACCCGAC CGCCTTCGCC CTGACCCGCC AGGAGGTGCA GGGCTACCAG GTCAATCCGT TCGGTCGCCA GGATTTCTCG CGGGTCGCCG TGAAACGCTG A
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Protein sequence | MRLAAFSLFL APLLLAQPAA AATLSVCTEA SPEGFDVVQY NSLTTTNASA DVLMNRLVEF DAGKGTVVPS LAERWSVSDD GLSYRFDLRQ GVHFHSTAYF KPSRTLDADD VVFSFQRMLD PANPWHKVAQ NGFPHAQSMQ LPELIKRVEK SGDHQVLIVL DHPDATFLPM LSMGFASIYS AEYADQLMKA GTPEKLNTAP IGSGPFVFKR FQKDAVVRYA ANPEYFAGKP AVDALIFAIT PDANVRLQKL RRGECQIALS PKPLDVESAR KDASLKVEQT PAFMTAFVAL NTQHPPLDDP KVRQAINLAF DRTSYLQAVF EGSASAATGI YPPNTWSYAR DIPAYPHDPE QARKLLAGKQ LPELNIWTRP SGSLLNPNPS LGAQLLQADL AEAGIKANIR VIEWGELIRR AKNGEHDLLF MGWAGDNGDP DNFLTPQFSC ASVKSGLNFA RYCDPGLDKL IADGKAASSQ EQRTGLYHQA QKLIHEQALW LPLAHPTAFA LTRQEVQGYQ VNPFGRQDFS RVAVKR
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