| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69910 |
|---|
| Symbol | rep |
|---|
| ID | 4385178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 6235930 |
|---|
| End bp | 6237939 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639328236 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_793770 |
|---|
| Protein GI | 116053444 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGAC TCAATCCCCG GCAGCAAGAA GCCGTGAACT ACGTCGGCGG TCCCCTGCTG
GTCCTGGCTG GCGCCGGCTC CGGCAAGACC AGCGTGATCA CCCGCAAGAT CGCCTATCTC
GTCCAGCAGT GCGGTATCCG CGCCCAGTAC ATCGTCGCCG TGACCTTCAC CAACAAGGCC
GCGCGGGAGA TGAAGGAGCG CGTCGGCACC CTGCTGCGCG GCGGCGAGGG CAAGGGCCTG
ACCGTCTCGA CCTTCCACAA CCTCGGCCTG AACATCATCC GCAAGGAACA CGAGCGGCTC
GGCTACAAGC CCGGTTTCTC GATCTTCGAC GAGTCGGACA TCAAGGCGCT GCTGACCGAC
ATCATGCAGA AGGAGTATTC CGGGGACGAC GGCGTCGACG AGATCAAGAA CTACATCGGC
GCCTGGAAGA ACGACCTGAT CCTTCCGGAG GAGGCGCTGG AAAAGGCCCG CAATCCCAAG
GAGCAGACCG CCGCGATCGT CTACCTGCAT TACCAGCGCA CCCTGCGCGC CTACAACGCG
GTGGACTTCG ACGACCTGAT CCTGCAACCG GTGAAGCTGT TCCAGGAACA TCCGGACGTC
CTCCAGAAGT GGCAGAACAA GGTGCGCTAC ATGCTGGTGG ACGAGTACCA GGACACCAAC
GCCAGCCAGT ACCTGCTGGT CAAGCTGCTG GTGAAGGACC GCGCCCAGTT CACCGTGGTC
GGCGACGACG ACCAGTCGAT CTACGCCTGG CGCGGCGCGC GCCCGGAAAA CCTGATGCAG
CTGAAGGAAG ACTTCCCTTC GCTGAAGGTG GTGATGCTGG AGCAGAACTA CCGCTCCACC
AGCCGCATCC TCAAGTGCGC GAACGTCCTC ATCGCCAACA ACCCGCACGT ATTCGAGAAG
CAGTTGTGGA GCGAGATGGG CCACGGCGAT CCGATCCGGG TGATCCGCTG CCGCAACGAG
GACGCCGAGG CCGAGCGCAT CGCCATGGAA ATCCTCACCC TGCACCTGCG CACCGAGCGG
CCGTACAGCG AGTTCGCCAT CCTCTACCGT GGCAACCACC AGGCCAAGCT GATGGAGCTG
AAGCTCCAGC ACCACCAGAT TCCCTATCGG CTCTCTGGCG GCACCAGCTT CTTCGGGCGC
CAGGAAGTGA AGGACCTGAT GTCCTACTTC CGCCTGCTGG TGAACCCCGA CGACGACAAC
GCCTTCCTCA GGGTGATCAA CGTGCCGCGC CGGGAAATCG GTTCGGCGAC CCTGGAGAAG
CTCGGCAACT ACGCCACCCA GCGCAAGATA TCGATGTACG CCGCCTGCGA CGAGATGGGC
CTGGCCGAGC ACCTCGACAG CCGTTTCCAC GAACGCCTGC AACGCTTCAA GCGCTGGATG
GACGGTATCC GCCGACAGTG CGCGGAGAAC GAGCCGATCG CCGTGCTGCG CAGCATGGTG
ATGGACATCG ACTACGAGAA CTGGCTGCGG CAGAACGCCT CCAGCGACAA GGTCGCCGAA
TTCCGCATGA GCAACGTCTG GTTCCTCATC GAGGCACTGA AGAACACCCT CGAGCGCGAC
GAGGAAGGCG ACATGACCAT CGAGCAGGCC ATCGCCAAGC TGGTCCTGCG CGACATGCTG
GAGCGCCAGC AGGAAGAAGA GGAAGGCGCC GAAGGCGTGC AGATGATGAC CCTGCACGCG
TCGAAGGGGC TGGAGTTCCC CTACGTGTTC ATCATGGGCA TGGAGGAAGA GATCCTGCCC
CACCGTTCCA GCATCGAGGC CGACACGGTG GAAGAGGAGC GCCGCCTGGC CTACGTCGGC
ATCACCCGCG CGCGGCAGAA CCTGGCGATG ACCTTCGCCG CCAAGCGCAA GCAATACGGC
GAGATCATCG ACTGCTCGCC GAGCCGCTTC CTCGACGAAC TGCCCCCCGA AGACCTCGAA
TGGGAAGGCA TGGAAGACGC CCCGCAAGAG GTCAAGGCGG CCAAGGGCAA CGCCGCCCTC
GCCGACATCC GCGCCATGCT CAAGCGCTGA
|
|---|
| Protein sequence | MSRLNPRQQE AVNYVGGPLL VLAGAGSGKT SVITRKIAYL VQQCGIRAQY IVAVTFTNKA
AREMKERVGT LLRGGEGKGL TVSTFHNLGL NIIRKEHERL GYKPGFSIFD ESDIKALLTD
IMQKEYSGDD GVDEIKNYIG AWKNDLILPE EALEKARNPK EQTAAIVYLH YQRTLRAYNA
VDFDDLILQP VKLFQEHPDV LQKWQNKVRY MLVDEYQDTN ASQYLLVKLL VKDRAQFTVV
GDDDQSIYAW RGARPENLMQ LKEDFPSLKV VMLEQNYRST SRILKCANVL IANNPHVFEK
QLWSEMGHGD PIRVIRCRNE DAEAERIAME ILTLHLRTER PYSEFAILYR GNHQAKLMEL
KLQHHQIPYR LSGGTSFFGR QEVKDLMSYF RLLVNPDDDN AFLRVINVPR REIGSATLEK
LGNYATQRKI SMYAACDEMG LAEHLDSRFH ERLQRFKRWM DGIRRQCAEN EPIAVLRSMV
MDIDYENWLR QNASSDKVAE FRMSNVWFLI EALKNTLERD EEGDMTIEQA IAKLVLRDML
ERQQEEEEGA EGVQMMTLHA SKGLEFPYVF IMGMEEEILP HRSSIEADTV EEERRLAYVG
ITRARQNLAM TFAAKRKQYG EIIDCSPSRF LDELPPEDLE WEGMEDAPQE VKAAKGNAAL
ADIRAMLKR
|
|---|
| |