| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69850 |
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| Symbol | |
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| ID | 4385173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6228394 |
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| End bp | 6230379 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639328231 |
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| Product | putative choline transporter |
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| Protein accession | YP_793765 |
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| Protein GI | 116053439 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.545233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACAC CCACTACCCC CCGGAGCACC CTGAATCCTC CGGTCTTCTA TACCTCCGCC
GCCCTGATCC TGGCCCTGGT GCTGTTCACC GTGCTCCTCC AGGAAGAAGC GCAATCGCTG
TTCAACCACG TCCAGCAATG GATCATCACC AACGCCAGCT GGTTCTACGT ACTGGCCGTG
GCGCTGATCC TGATCAGCGT GGTGTTCCTC GCCGTCAGCC GCTACGGCGA CATCAAGCTC
GGCCCCGACC ACAGTCGTCC CGACTACCGC AACACCACCT GGTTCGCCAT GCTGTTCTCC
GCCGGCATGG GCATCGGTCT GATGTTCTTC GGCGTTGCCG AACCGGTGAT GCACTTCACC
ACCCCACCGG TAGGCGAGCC GAACACCGTG CAGGCGGCGA AGGAAGCGAT GAAGCTGACC
TTCTTCCACT GGGGCCTGCA TGCCTGGGCG ATCTACGCCA TCGTCGCGCT GATCCTGGCC
TTCTTCAGCT ATCGCCACGG CCTGCCGCTG ACCCTGCGCT CGGCGCTGTA TCCGCTGATC
GGCGAACGTA TCTACGGCCC CATCGGCCAC GCGGTGGATA TCTTCGCGAT CATCGGCACC
GTGTTCGGCG TGGCGACTTC GCTCGGCTAC GGCGTGCTGC AGATCAACAG CGGCCTGCAC
CACCTGTTCG GCTGGCCGGT GAACCAGACC GTGCAGATCG CCCTGATCGC CGCCACCTGC
GGCCTCGCCA CGCTCTCGGT GGCCAGCGGA CTGGACCGCG GCATCCGCAT CCTGTCCGAG
CTGAACCTGA GCCTGGCGGT GATCCTGCTG CTCTTCGTGC TGGTCCTCGG GCCGACCGTG
TTCCTCCTGC AAACCTACGT GCAGAACACC GGGGCCTACC TGTCCGACAT CGTCAACAAG
ACCTTCAACC TGTACGCCTA CGAGCCCACC GACTGGATCG GCGGCTGGAC CCTGCTGTAC
TGGGGCTGGT GGCTGTCCTG GTCGCCCTTC GTCGGCCTGT TCATCGCCCG TATCTCGCGC
GGCCGCACGA TCCGCGAGTT CGTCTGCGGC GTGCTGTTCG TCCCGGCCGG CTTCACCCTG
CTGTGGATGA CGGTGTTCGG CGATACCGCC ATCCACATGG TCCTGCAGGA GGGCTTCACC
CAGTTGGCCG AAGTGGTCAA CCAGGACAGT TCGGTGGCGC TGTTCGCCTT CCTCGAGCAC
TTCCCGCTGG GCAGCGTGAT TTCGCTGGTG GCGGTGCTGA TGGTGGTGGT GTTCTTCGTC
ACCTCGGCCG ACTCCGGCGC GCTGGTGGTG GACATGCTGG CCTCCAGCGG CAAGGACCAC
TCGCCGCTCT GGCAGCGGAT ATTTTGGTCG GTGCTGATGG GCGTGGTGGC CATCGCCCTG
CTCCTCGCCG ATGGCCTCAA GGCGCTGCAA ACCGCGACCA TCGCCAGCGC GCTGCCATTC
TCCATCGTGC TCCTGGCGTC GATCTGGGGC CTGTTCAAGG CGCTGCACCT GGATGCCACC
AAGCGCGGCA TCCGCTACCA GGCGCTGACC TTCTCCCGCC CCACCACGCG CAGCGGCGCA
AGCGAGGGCG ACGGTTGGCA GCGCCGCTTG CGCAACATCG CCATGTTCCC GAGGCGCAGC
CACGTCAACC GCTTCATCAC CGATGTGGCG CGACCGGCCT GCGAGGACGT CGCCGCCGAA
CTGCGCAAGC AGGGCTACGA AGTCCAGGTG CAGGACGGCG AGGACGGCCG GGTTCGGCTG
GAAGTCAGCC ACGGCGGCGA GGTCGATTTC ATCTACGAGG TGCGTCCGCG CGCCTTCACC
ACGCCGAGCT TCGTGATGCG CGACACCGAG GACAGCAGCG AGTCGCGCAA GTATTTCCGC
GCCGAGGTCC ATCTCCAGGA AGGCGGCCAG GACTACGACA TCATGGGCTG GAGCCGCGAC
GGCGTGATCG GCGACATCCT CGATCAGTAC GAGCGGCACA TGCACTTCCT GCACGTGGTG
CGCTGA
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| Protein sequence | METPTTPRST LNPPVFYTSA ALILALVLFT VLLQEEAQSL FNHVQQWIIT NASWFYVLAV
ALILISVVFL AVSRYGDIKL GPDHSRPDYR NTTWFAMLFS AGMGIGLMFF GVAEPVMHFT
TPPVGEPNTV QAAKEAMKLT FFHWGLHAWA IYAIVALILA FFSYRHGLPL TLRSALYPLI
GERIYGPIGH AVDIFAIIGT VFGVATSLGY GVLQINSGLH HLFGWPVNQT VQIALIAATC
GLATLSVASG LDRGIRILSE LNLSLAVILL LFVLVLGPTV FLLQTYVQNT GAYLSDIVNK
TFNLYAYEPT DWIGGWTLLY WGWWLSWSPF VGLFIARISR GRTIREFVCG VLFVPAGFTL
LWMTVFGDTA IHMVLQEGFT QLAEVVNQDS SVALFAFLEH FPLGSVISLV AVLMVVVFFV
TSADSGALVV DMLASSGKDH SPLWQRIFWS VLMGVVAIAL LLADGLKALQ TATIASALPF
SIVLLASIWG LFKALHLDAT KRGIRYQALT FSRPTTRSGA SEGDGWQRRL RNIAMFPRRS
HVNRFITDVA RPACEDVAAE LRKQGYEVQV QDGEDGRVRL EVSHGGEVDF IYEVRPRAFT
TPSFVMRDTE DSSESRKYFR AEVHLQEGGQ DYDIMGWSRD GVIGDILDQY ERHMHFLHVV
R
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