| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69690 |
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| Symbol | dapF |
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| ID | 4385062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6215945 |
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| End bp | 6216775 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639328218 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_793752 |
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| Protein GI | 116053427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0119345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.292475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTGC GCTTCACCAA GATGCATGGC CTGGGCAACG ACTTCATGGT CCTCGACCTG
GTCAGCCAGC ACGCCCATGT GCAGCCCAAG CACGTCAAGC TCTGGGGCGA CCGCAACACC
GGGGTCGGCT TCGACCAGTT GCTGATCGTC GAAGCCCCGA GCAGCCCCGA CGTCGACTTC
CGCTACCGGA TTTTCAACGC CGACGGCTCC GAGGTCGAGC AGTGCGGCAA CGGCGCCCGC
TGCTTCGCCC GCTTCGTTCA GGACAAGCGC CTGACGGTGA AGAAGAGCAT CCGCGTAGAA
ACCAAGGGCG GCATCATCGA GCTGAATATC CGCCCGGACG GCCAGGTCAC GGTGGACATG
GGTCCGCCGC GCCTGGCCCC GGCCGAGATA CCGTTCCAGG CCGAGCGCGA AGCCTTGTCC
TATGAGATAG AGGTGAATGG CCAGCGCGTC GAACTGGCCG CGGTATCCAT GGGCAATCCC
CATGGCGTGC TGCGCGTCGA GAACGTCGAC AGCGCACCGG TACACAGCCT CGGTCCGCAA
CTGGAAGTCC ATCCGCGCTT CCCGAAGAAG GCCAACATCG GCTTCCTCCA GGTGCTCGAT
CCGCACCATG CGCGCCTGCG CGTCTGGGAG CGCGGCGTCG GCGAGACCCA GGCCTGCGGC
ACCGGCGCCT GCGCCGCGGC GGTTGCCGGG ATTCGCCAGG GCTGGCTGCA ATCGCCGGTG
CAGATCGACC TCCCCGGCGG CCGCCTGCAC ATCGAGTGGG CAGGTCCCGG CCAGCCCGTT
ATGATGACCG GGCCTGCCGT CCGCGTGTAT GAAGGCCAGG TCCGCCTGTA A
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| Protein sequence | MLLRFTKMHG LGNDFMVLDL VSQHAHVQPK HVKLWGDRNT GVGFDQLLIV EAPSSPDVDF
RYRIFNADGS EVEQCGNGAR CFARFVQDKR LTVKKSIRVE TKGGIIELNI RPDGQVTVDM
GPPRLAPAEI PFQAEREALS YEIEVNGQRV ELAAVSMGNP HGVLRVENVD SAPVHSLGPQ
LEVHPRFPKK ANIGFLQVLD PHHARLRVWE RGVGETQACG TGACAAAVAG IRQGWLQSPV
QIDLPGGRLH IEWAGPGQPV MMTGPAVRVY EGQVRL
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