| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68850 |
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| Symbol | gcvP1 |
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| ID | 4385387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 6140394 |
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| End bp | 6143270 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639328151 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_793685 |
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| Protein GI | 116053361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGA CGCCGTCCCT CGCCCAGCTC CAGCCCGCCG ATGCCTTCCT GCGCCGCCAC
CTCGGCCCCG ATCCGGCGGA ACAGCAGGCC ATGCTGGATT TCCTCGGAGT TTCCACTCGC
GCCGAACTGA TCGTGCAGAC GGTGCCGCCG GCGATCCGCC TCAACCGGCC GCTGGAACTG
CCCGCCGCGC TCGACGAACA GGCCGCCCTG GCGCGCCTGC GCGGCTACGC CGGACTCAAC
CAGCGCTGGA CCAGCCTGAT CGGCATGGGC TACTACGGCA CCGTGACGCC GCCGGTGATC
CTCCGCAACG TGCTGGAGAA TCCCGGCTGG TACACCGCCT ATACGCCCTA CCAGCCGGAA
ATCGCCCAGG GCCGCCTGGA AGCGCTGCTG AATTTCCAGC AACTGACCAT CGACCTCACC
GGACTCGACC TGGCCAGCGC CTCGCTGCTC GACGAAGCCA CCGCCGCCGC CGAGGCCATG
GCCCTGGCCA GGCGGGTGGC GAAGGCCAGG AGCAACCGGT TCTTCGTCGA TGCGCATTGC
CATCCGCAGA CCGTTTCGGT GTTGCGTACC CGCGCCGAGG CGTTCGGTTT CGAGCTGGTC
GTCGACGAGC CGGACAATCT TGCCGCCCAC GCGGTGTTCG GCGCCTTGCT GCAATACCCG
GACAGTCGCG GCGAGATCCG CGACCTGCGC CCGCTTATCG AGGCGTTGCA CGGCCAACAG
GCGCTGGCTT GCGTCGCCAG CGACCTGCTC GCCCTGTTGG TGCTGACCCC GCCGGGGGAA
CTCGGTGCCG ACGTGGTGCT CGGCAGCGCC CAGCGCTTTG GCGTACCGAT GGGCTACGGC
GGGCCGCACG CGGCGTTCTT CGCCACCCGC GAAGGGTACA AGCGGGCAAT GCCGGGGCGG
ATCATCGGCG TTTCCCGCGA CGCCCGCGGC AACCCGGCGT TGCGCATGGC CCTGCAAACC
CGCGAGCAGC ACATCCGTCG GGAAAAGGCC AACTCGAACA TCTGCACCGC CCAGGTGTTG
CTGGCCAACA TTGCTTCGCT GTATGCCGTC TACCATGGGC CGCAGGAGCT GAAACGCATC
GCCCAACGCG TCCAGCGCCT GACCGCGCTG CTGGCGGCGG GCCTGGAAAG CAAGGGACTG
CGGCGGCTCA ACCGGCACTT CTTCGACACC CTGACCTACG AGGTCGGCGA GCGTCAGGCG
GCGATCCTCG AACGGGCGCG GGCGGCACGG GTCAACCTGC GCGTGGTCGA CGACCGGCGG
CTGGCCCTGA GCCTCGACGA AACCTGTGAC GCGGCGACCC TGGCGACCCT GTTCGAGATC
TTCCTCGGCG CCGGCCACGG GCTGGATGTC GCGCACCTGG ATGGCGGGGC GGTGGCCGAC
GGCATCCCGG CGGTCCTGCA ACGCACTTCG GCCTACCTGC AGCATCCGGT GTTCAACGCC
CACCACAGCG AGACCGAGAT GCTTCGCTAC CTGCGCCAGC TGGAAGGCAA GGACCTGGCG
CTGAACCAGG CGATGATCCC GCTCGGCTCC TGCACCATGA AGCTCAACGC CAGCAGCGAA
ATGATCCCCA TCACCTGGCC GGAATTCGCC GAACTGCATC CGTTCGTGCC GCGCGAGCAG
GCCGAGGGCT ATCGCCGGAT GATCGACGAA CTGGAAGCCT GGCTGCGGGC GATCACCGGC
TTCGACGCCA TCTGCATGCA GCCGAACTCG GGAGCACAGG GCGAATATGC CGGGTTGCTG
GCGATCCGCC GCTATCACCA GAGCCGCGGC GATAGCCAGC GCGACATCTG CCTGATCCCC
GCATCGGCGC ATGGCACCAA CCCGGCCTCG GCGATCATGG CCAGCATGCG GGTGGTGATC
GTCGAGTGCG ATCCCTGCGG CAACGTCGAC CTCGACGACC TGCGCCTCAA GGCGGCCGAG
GCGGGCGACC GGCTGTCCTG CCTGATGATC ACCTATCCCT CGACCCACGG CGTCTACGAA
GAGGGGATAG GCGAGATCTG CGAAGTGGTC CACCGCCACG GCGGCCAGGT CTACATGGAC
GGCGCCAACC TCAACGCCCA GGTCGGCCTG GCGCGACCGG CGGACATCGG CGCGGACGTC
TCGCACATGA ACCTACACAA GACCTTCTGC ATCCCCCATG GTGGTGGCGG GCCGGGCATG
GGGCCGATCG GGGTCAAGCG GCACCTGGCG CCGTTCGTCG CCAACCATCC GGTGATCCGC
GTCGAAGGGC CGAACCCGCT GAACGACGCG GTCAGCGCGG CGCCCTGGGG CAGCGCCAGC
ATCCTGCCGA TCAGTTGGAT GTACATCGCC ATGATGGGCC CGCAGCTGGC CGACGCCAGC
GAGGTGGCGA TCCTCTCCGC CAACTACCTG GCGAACCGCC TGGACGGGGC GTTCCCGGTG
CTCTACCGCG GGCGCAACGA GCGCGTCGCC CACGAATGCA TCCTCGACCT GCGACCGCTC
AAGGCGCAGA CCGGGATAAC CGAGGAAGAC GTGGCCAAGC GCCTGATGGA CTACGGCTTC
CACGCCCCGA CCATGTCCTT CCCGGTGCCG GGCACGCTGA TGGTGGAGCC GACCGAGAGC
GAGTCGAAGG CGGAGCTGGA TCGCTTCGTC GAGGCGATGC TGAGCATCAG GGCCGAGATC
GGCAAGGTGG AGAGCGGCGC CTGGCCGGCG GAGGACAACC CGCTGAAACG GGCGCCGCAT
ACCCTGGCCG ACGTCACCGG GATCTGGCAG AGACCCTACG AGATCGCCGA GGCAGTGACC
CCGAGCGAAC ATGCGCGGGC GTTCAAGTAC TGGCCGGCGG TTAACCGGGT GGACAACGTC
TACGGCGACC GCAACCTGTT CTGCGCCTGC GTGCCGCTGG ACGACTACCG CGAGTGA
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| Protein sequence | MSQTPSLAQL QPADAFLRRH LGPDPAEQQA MLDFLGVSTR AELIVQTVPP AIRLNRPLEL
PAALDEQAAL ARLRGYAGLN QRWTSLIGMG YYGTVTPPVI LRNVLENPGW YTAYTPYQPE
IAQGRLEALL NFQQLTIDLT GLDLASASLL DEATAAAEAM ALARRVAKAR SNRFFVDAHC
HPQTVSVLRT RAEAFGFELV VDEPDNLAAH AVFGALLQYP DSRGEIRDLR PLIEALHGQQ
ALACVASDLL ALLVLTPPGE LGADVVLGSA QRFGVPMGYG GPHAAFFATR EGYKRAMPGR
IIGVSRDARG NPALRMALQT REQHIRREKA NSNICTAQVL LANIASLYAV YHGPQELKRI
AQRVQRLTAL LAAGLESKGL RRLNRHFFDT LTYEVGERQA AILERARAAR VNLRVVDDRR
LALSLDETCD AATLATLFEI FLGAGHGLDV AHLDGGAVAD GIPAVLQRTS AYLQHPVFNA
HHSETEMLRY LRQLEGKDLA LNQAMIPLGS CTMKLNASSE MIPITWPEFA ELHPFVPREQ
AEGYRRMIDE LEAWLRAITG FDAICMQPNS GAQGEYAGLL AIRRYHQSRG DSQRDICLIP
ASAHGTNPAS AIMASMRVVI VECDPCGNVD LDDLRLKAAE AGDRLSCLMI TYPSTHGVYE
EGIGEICEVV HRHGGQVYMD GANLNAQVGL ARPADIGADV SHMNLHKTFC IPHGGGGPGM
GPIGVKRHLA PFVANHPVIR VEGPNPLNDA VSAAPWGSAS ILPISWMYIA MMGPQLADAS
EVAILSANYL ANRLDGAFPV LYRGRNERVA HECILDLRPL KAQTGITEED VAKRLMDYGF
HAPTMSFPVP GTLMVEPTES ESKAELDRFV EAMLSIRAEI GKVESGAWPA EDNPLKRAPH
TLADVTGIWQ RPYEIAEAVT PSEHARAFKY WPAVNRVDNV YGDRNLFCAC VPLDDYRE
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