Gene PA14_68420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_68420 
Symbol 
ID4384400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6103138 
End bp6104058 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content67% 
IMG OID639328116 
ProductLysR family transcriptional regulator 
Protein accessionYP_793650 
Protein GI116053326 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.244196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.506187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA AGCAACTGAA ATTCCTCTGC GCCCTCGACG AAACCCGCCA CTTCGGCCAG 
GCCGCCGCAC GCTGCCACGT CACCCAGCCG ACCCTGTCCA TGCGCCTGCG CAGCCTGGAA
GAAGAACTCG GCCTGGAACT GGTGCGACGC AGCCAACGCT TCGAAGGCTT CACCGAGGCC
GGCGAGCGCG TACTGGCCTG GGCACGCAGC CTGCTGGCGG CCCAGGAAGG GCTGTACGCG
GAAGCCGCCG CCTGCCGCGG CCAACTGGTC GGGACCCTGC GCCTGGGCGT GGTGCCGCTG
GCCAGCTTCG ACCCGATGCG CCTGGTCCAG CACATGGCCG GGCGCCACCC GGAGTTGCGT
TTCCAGCTCT ATTCCCTGAG TTCGGAACAG GTACTCGAAG GCCTGGCGCG CAACCAGTTC
GATCTCGGCG TCTCTTATCT GGACCGTCTG GACCGCAGCC ATTTCGAGGG CATCGAACTG
GCGGAGACCC GCATGGGCCT GCTCCATCAT CCCAGCCATT TCCCGCTCGA CGCCGCGCTG
CTGAACTGGG ATGCGCTGGC TGGCCTGCCG CTGGGCCTGC TCTCGGCGGG CATGCACTTC
CGCCAATCCA TCGACCACAA CTTCCGCAGC CGCGGGCTGA GCCCCATCGC GCGCCTGGAA
ACCGACTCGG TGCAGCAACT GCTGCAGGCG GTGCAGCGTG GCTTGTGCTG CGCGATCATG
CCGTTGGGCA GCGAAGTCGA CGACGAGTTG CGCCTGGTCC CCATCGAGGA CGCCCATACC
CTGGCAGCGC TCGGCCTGAT CATTCGCAGC GGACAGCCGC GCTCGGCGCT GGCCGAAGCC
TGCTTCGAGG AGGCCCGGAC CTGGCTGGCG CCCGCCGGCT TGATAGACCC TGTCGATCAG
GGTATCGGCA CAACCGATTA G
 
Protein sequence
MDIKQLKFLC ALDETRHFGQ AAARCHVTQP TLSMRLRSLE EELGLELVRR SQRFEGFTEA 
GERVLAWARS LLAAQEGLYA EAAACRGQLV GTLRLGVVPL ASFDPMRLVQ HMAGRHPELR
FQLYSLSSEQ VLEGLARNQF DLGVSYLDRL DRSHFEGIEL AETRMGLLHH PSHFPLDAAL
LNWDALAGLP LGLLSAGMHF RQSIDHNFRS RGLSPIARLE TDSVQQLLQA VQRGLCCAIM
PLGSEVDDEL RLVPIEDAHT LAALGLIIRS GQPRSALAEA CFEEARTWLA PAGLIDPVDQ
GIGTTD