Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68420 |
Symbol | |
ID | 4384400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6103138 |
End bp | 6104058 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328116 |
Product | LysR family transcriptional regulator |
Protein accession | YP_793650 |
Protein GI | 116053326 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.244196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.506187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA AGCAACTGAA ATTCCTCTGC GCCCTCGACG AAACCCGCCA CTTCGGCCAG GCCGCCGCAC GCTGCCACGT CACCCAGCCG ACCCTGTCCA TGCGCCTGCG CAGCCTGGAA GAAGAACTCG GCCTGGAACT GGTGCGACGC AGCCAACGCT TCGAAGGCTT CACCGAGGCC GGCGAGCGCG TACTGGCCTG GGCACGCAGC CTGCTGGCGG CCCAGGAAGG GCTGTACGCG GAAGCCGCCG CCTGCCGCGG CCAACTGGTC GGGACCCTGC GCCTGGGCGT GGTGCCGCTG GCCAGCTTCG ACCCGATGCG CCTGGTCCAG CACATGGCCG GGCGCCACCC GGAGTTGCGT TTCCAGCTCT ATTCCCTGAG TTCGGAACAG GTACTCGAAG GCCTGGCGCG CAACCAGTTC GATCTCGGCG TCTCTTATCT GGACCGTCTG GACCGCAGCC ATTTCGAGGG CATCGAACTG GCGGAGACCC GCATGGGCCT GCTCCATCAT CCCAGCCATT TCCCGCTCGA CGCCGCGCTG CTGAACTGGG ATGCGCTGGC TGGCCTGCCG CTGGGCCTGC TCTCGGCGGG CATGCACTTC CGCCAATCCA TCGACCACAA CTTCCGCAGC CGCGGGCTGA GCCCCATCGC GCGCCTGGAA ACCGACTCGG TGCAGCAACT GCTGCAGGCG GTGCAGCGTG GCTTGTGCTG CGCGATCATG CCGTTGGGCA GCGAAGTCGA CGACGAGTTG CGCCTGGTCC CCATCGAGGA CGCCCATACC CTGGCAGCGC TCGGCCTGAT CATTCGCAGC GGACAGCCGC GCTCGGCGCT GGCCGAAGCC TGCTTCGAGG AGGCCCGGAC CTGGCTGGCG CCCGCCGGCT TGATAGACCC TGTCGATCAG GGTATCGGCA CAACCGATTA G
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Protein sequence | MDIKQLKFLC ALDETRHFGQ AAARCHVTQP TLSMRLRSLE EELGLELVRR SQRFEGFTEA GERVLAWARS LLAAQEGLYA EAAACRGQLV GTLRLGVVPL ASFDPMRLVQ HMAGRHPELR FQLYSLSSEQ VLEGLARNQF DLGVSYLDRL DRSHFEGIEL AETRMGLLHH PSHFPLDAAL LNWDALAGLP LGLLSAGMHF RQSIDHNFRS RGLSPIARLE TDSVQQLLQA VQRGLCCAIM PLGSEVDDEL RLVPIEDAHT LAALGLIIRS GQPRSALAEA CFEEARTWLA PAGLIDPVDQ GIGTTD
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