| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68290 |
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| Symbol | |
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| ID | 4384390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6091005 |
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| End bp | 6092288 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639328106 |
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| Product | C4-dicarboxylate transporter |
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| Protein accession | YP_793640 |
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| Protein GI | 116053316 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.13758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC TGTTCCTCTT CCTGCTGCTG TTCCTGCTGA TGTTCATCGG CGTGCCGATC
GCCGTCTCCC TGGGGCTCTC CGGTGCGCTG ACGATCCTCC TGTTCAGCCC GGACTCGGTA
CGCTCGCTGG CGATCAAGCT GTTCGAGACC TCCGAGCACT ACACCCTGCT GGCGATCCCG
TTCTTCCTGC TCTCCGGCGC GTTCATGACC ACCGGCGGGG TGGCGCGGCG CCTGATCGAC
TTCGCCAACG CCTGCGTCGG GCATATTCGC GGCGGCCTTG CGATCGCCGC GGTGCTCGCC
TGCATGCTCT TCGCCGCGCT GTCCGGTTCC TCGCCGGCGA CGGTGGCGGC GGTCGGCTCG
ATCGCCATCG CCGGCATGGT CCGTTCGGGC TACCCACAGG CGTTCGGCGC CGGGATCGTC
TGCAACGCCG GCACCCTGGG CATCCTCATC CCACCGTCGA TCGTCATGGT GGTCTATGCC
GCGGCGACCG AAACCTCGGT CGGCAAGCTG TTCATGGCCG GCGTGGTCCC CGGACTATTG
CTGGGCCTGA TCCTGATGGT GGTGATCTAC ATCGTCGCGC GGGTCAAGAA GCTGCCGGCC
ATGCCGAGAG TCAGCCTTCG CGAATGGATC GCCAGCGCGC GCAAGGCGCT CTGGGGCCTG
CTGCTGATGG TGATCATTCT CGGCGGCATC TATTCGGGCG CCTTCACCCC AACCGAGGCT
GCCGCCGTCG CGGCCGTGTA CTCGGCGTTC GTGGCGCTGT TCGTGTACAA GGACATGCGC
CTGAAAGAGT GCCCGAAGGT GCTGCTGGAG TCCGGCAAGC TGACCATCAT GCTGATGTTC
ATCATCGCCA ACGCCATGCT CTTCGCCCAT GTGCTGACCA CCGAGCAGAT TCCGCAGAGT
ATCGCCGCCT GGGTCACCGA CCTCGGGCTG TCGCCGTGGA TGTTCCTGCT GGTGGTGAAC
ATCGTGCTGC TGATCGCCGG CAACTTCATG GAGCCCTCGG CGATCATCCT GATCCTGGCA
CCGATCTTCT TCCCCATCGC CATGGAGCTG GGTATCGATC CGATCCACCT CGGCATCATC
ATGGTGGTGA ACATGGAGAT CGGCCTGATC ACCCCGCCGG TCGGCCTCAA CCTGTTCGTC
ACCTCGGCGG TCACCGGCAT GCCGCTGGGC GCGACCATCC GCGCGGCGCT GCCGTGGCTG
ATGATCCTGC TGGTGTTCCT GATCATCGTG ACCTACATCC CGGCGGTATC CATGGCATTG
CCGAACTGGC TGGGGATGAG CTGA
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| Protein sequence | MTILFLFLLL FLLMFIGVPI AVSLGLSGAL TILLFSPDSV RSLAIKLFET SEHYTLLAIP
FFLLSGAFMT TGGVARRLID FANACVGHIR GGLAIAAVLA CMLFAALSGS SPATVAAVGS
IAIAGMVRSG YPQAFGAGIV CNAGTLGILI PPSIVMVVYA AATETSVGKL FMAGVVPGLL
LGLILMVVIY IVARVKKLPA MPRVSLREWI ASARKALWGL LLMVIILGGI YSGAFTPTEA
AAVAAVYSAF VALFVYKDMR LKECPKVLLE SGKLTIMLMF IIANAMLFAH VLTTEQIPQS
IAAWVTDLGL SPWMFLLVVN IVLLIAGNFM EPSAIILILA PIFFPIAMEL GIDPIHLGII
MVVNMEIGLI TPPVGLNLFV TSAVTGMPLG ATIRAALPWL MILLVFLIIV TYIPAVSMAL
PNWLGMS
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