Gene PA14_68280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_68280 
Symbol 
ID4384389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand+ 
Start bp6090376 
End bp6091008 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content67% 
IMG OID639328105 
Productdicarboxylate transporter 
Protein accessionYP_793639 
Protein GI116053315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.408841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.10811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGC TCGCGCGCGT CTGGGCGCGC CTGGAGGAAG GCCTGATCGC CTTCCTCCTC 
GCCGCCATGA CGCTGGTTAC CTTCGTTTAT GTGGTCCTCA ACAACCTCTA CACGCTGTTC 
TACGATCTCG CCGACCTCTG GGAGGGCGGC AACGAGACGC TGCTCGCCAT CGGCGACGCC 
ATCCTCAGCC TGGCCCAGGA GATGACCTGG AGTAACGCCC TGACCAAGGC CCTGTTCGCC 
TGGCTGATCT TCCTCGGCAT CGCCTACGGC GTACGCACCG CCGGGCACCT CGGCGTGGAC 
GTGCTGGTGA AGCTGGCTTC GCGGCCGGTA CAGCGGGTCC TCGGCGTGAT CGCCTGCCTG 
GCCTGCCTCG GCTACGCCGG CCTGCTCTGC GTGGCCAGCT ACGACTGGGT GAAGACCCTG 
TTCATCGCCG GCATCGGCGC CGAGGACCTC GACCACTTCG GCATCCGCCA ATGGCACATC 
GGCCTGATCG TGCCGGTCGG TTTCGCCCTG GTGTTCATCC GTTTCGCCGA GATCCTCGTG 
CGCATCCTGC GCAACCGTCA GACCGGCCTG GGCCTGGCCG ACGAGGCCGC CGACGCGCTG 
AAGCTGACCG AGCACGAGGA GCCGAAAGCA TGA
 
Protein sequence
MHALARVWAR LEEGLIAFLL AAMTLVTFVY VVLNNLYTLF YDLADLWEGG NETLLAIGDA 
ILSLAQEMTW SNALTKALFA WLIFLGIAYG VRTAGHLGVD VLVKLASRPV QRVLGVIACL 
ACLGYAGLLC VASYDWVKTL FIAGIGAEDL DHFGIRQWHI GLIVPVGFAL VFIRFAEILV 
RILRNRQTGL GLADEAADAL KLTEHEEPKA