| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68260 |
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| Symbol | |
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| ID | 4383481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6089362 |
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| End bp | 6090357 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639328104 |
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| Product | c4-dicarboxylate-binding protein |
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| Protein accession | YP_793638 |
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| Protein GI | 116053314 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.298886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.12904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC ACACCGCGAA GGCGCTCGTC TGCGCACTTT CCCTGACCGT CGCCGGAATC
GTCCAGGCGG CCGACCCGAT CGTCATCAAG TTCTCCCACG TCGTCGCCGA GCACACGCCC
AAGGGCCAGG GCGCGCTGCT GTTCAAGAAA CTGGTGGAGG AACGCCTACC GGGCAAGGTC
AAGGTGGAGG TCTACCCGAA CTCGTCGCTG TTCGGCGACG GCAAGGAAAT GGAGGCCCTG
CTGCTAGGCG ACGTGCAGAT CATCGCGCCG TCGCTGGCCA AGTTCGAGCA GTACACCAAG
AAACTGCAGA TCTTCGACCT GCCGTTCCTG TTCGACAACA TCCAGGCGGT CGACCGCTTC
CAGCAGAGCC CGCAGGGCAA GGAGCTGCTG ACCTCGATGC AGGACAAGGG CATCACCGGC
CTCGGCTACT GGCACAACGG GATGAAGCAA CTGTCCGCCA ACAAGCCCCT GCGCGAGCCG
AAGGACGCCC GCGGCCTGAA GTTCCGCGTG CAGGCCTCCA AGGTGCTCGA GGAACAGTTC
AAGGCGGTGC GCGCCAACCC GCGCAAGATG AGCTTCGCCG AGGTCTACCA GGGCCTGCAG
ACCGGCGTGG TCAACGGTAC CGAGAACCCC TGGTCGAACA TCTACTCGCA GAAGATGCAC
GAAGTGCAGA AGTACATCAC CGAATCCGAC CACGGCGTGC TGGACTACAT GGTGATCACC
AACACCAAGT TCTGGAACGG CCTGCCGGAA GACGTGCGCG GCGTTCTGGC CAAGACCATG
GACGAGGTGA CCGTGGAGGT GAACAAGCAG GCCGAGGCGC TCAACCAGGG CGACAAGCAG
CGCATCGTCG AGGCCAAGAC CAGCGAGATC ATCGAACTCA CTCCCGAACA GCGGGCCGAA
TGGCGCAAGG CCATGCAGCC GGTGTGGAAG AAGTTCGAAG GTGAGATCGG CGCCGACCTG
ATCAAGGCCG CCGAAGCCGC CAACCAGGCT CAATAA
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| Protein sequence | MLKHTAKALV CALSLTVAGI VQAADPIVIK FSHVVAEHTP KGQGALLFKK LVEERLPGKV
KVEVYPNSSL FGDGKEMEAL LLGDVQIIAP SLAKFEQYTK KLQIFDLPFL FDNIQAVDRF
QQSPQGKELL TSMQDKGITG LGYWHNGMKQ LSANKPLREP KDARGLKFRV QASKVLEEQF
KAVRANPRKM SFAEVYQGLQ TGVVNGTENP WSNIYSQKMH EVQKYITESD HGVLDYMVIT
NTKFWNGLPE DVRGVLAKTM DEVTVEVNKQ AEALNQGDKQ RIVEAKTSEI IELTPEQRAE
WRKAMQPVWK KFEGEIGADL IKAAEAANQA Q
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