Gene PA14_68210 details

Gene Information

• Locus tag: PA14_68210
• Symbol: rmlC
• ID: 4383478
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa UCBPP-PA14
• Kingdom: Bacteria
• Replicon accession: NC_008463
• Strand: +
• Start bp: 6085293
• End bp: 6085838
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639328101
• Product: dTDP-4-dehydrorhamnose 3,5-epimerase
• Protein accession: YP_793635
• Protein GI: 116053311
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes
• TIGRFAM ID: [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 46
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.0501162
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGCGA CCCGCCTGGC AATCCCCGAC GTCATCCTCT TCGAACCCCG GGTGTTCGGC 
GACGATCGCG GATTCTTCTT CGAAAGCTAC AACCAGCGCG CCTTCGAGGA GGCCTGCGGT 
CATCCGGTCA GCTTCGTCCA GGACAACCAT TCGCGTTCCG CCCGTGGCGT CCTCCGCGGC 
CTGCACTACC AGATCCGGCA AGCCCAGGGA AAACTGGTGC GCGCCACCCT CGGCGAGGTA 
TTCGACGTGG CCGTCGACCT GCGTCGCGGC TCGCCGACCT TCGGCCAGTG GGTAGGCGAA 
CGCCTGAGCG CGGAGAACAA GCGCCAGATG TGGATTCCGG CCGGCTTCGC GCACGGCTTC 
GTGGTGCTCA GCGAATACGC CGAGTTCCTC TACAAGACCA CCGACTTCTG GGCGCCGGAA 
CACGAACGCT GCATCGTCTG GAACGATCCC GAGCTGAAGA TCGACTGGCC GCTGCAGGAT 
GCCCCCCTGC TTTCGGAGAA GGACCGCCAG GGCAAGGCAT TCGCCGACGC CGACTGCTTC 
CCCTGA 

 

Protein sequence

MKATRLAIPD VILFEPRVFG DDRGFFFESY NQRAFEEACG HPVSFVQDNH SRSARGVLRG 
LHYQIRQAQG KLVRATLGEV FDVAVDLRRG SPTFGQWVGE RLSAENKRQM WIPAGFAHGF 
VVLSEYAEFL YKTTDFWAPE HERCIVWNDP ELKIDWPLQD APLLSEKDRQ GKAFADADCF 
P