Gene PA14_68090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_68090 
Symbol 
ID4383469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6074991 
End bp6075683 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content68% 
IMG OID639328091 
ProductABC transporter permease 
Protein accessionYP_793626 
Protein GI116053302 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0277184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0135289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT GGGAGCTGAT CCTCAAGTGG ATGCCGAAGA TGCTCCAGGG CGCGGCGCTG 
ACCCTGGAGC TGCTGGCGAT CGCGGTGGTC GCCGGGCTCG CCCTGGCCCT GCCGCTGGGC
ATCGCCCGCG CCTCGCGGCA CTGGTACGTG CGCGCGGTGC CGTACGCCTA CATCTTCTTC
TTCCGCGGCA CGCCGCTGCT GCTGCAACTG TTCATCGTCT ACTACGGCCT GGCGCAGTTC
GAGGAAGTGC GCAAGAGCGC CTTCTGGCCC TACCTGCGCG ATCCGTACTG GTGCGCGCTG
CTGACCATGA CCCTGCACAC CGCCGCCTAT ATCGCCGAGA TCCTCCGCGG CGCGATCCAC
TCGGTGCCGG TCGGCGAGGT GGAGGCCGCC CGCGCCCTCG GCATGTCGCG GCGCCAGGCG
CTCTGGCACA TCATCCTGCC GCGCGCGGTG CGCATCGGCC TGCCGGCCTA CAGCAACGAA
GTGATCCTGA TGCTCAAGGC CAGCGCGGTG GTCTACACCG TGACCCTGTT CGACATCATG
GGCATGGCCC GGACCATCAT CGCCCGCACC TACGAATCGA TGCTGTTCTT CTGCCTGGCC
GGCGCGCTGT ACCTGGTGAT CACCATCGTG CTGACGCGGA TCTTCCGCCT GATCGAACGC
TGGTTGCGGG TCGACGCTAC CCAGGGCCGC TGA
 
Protein sequence
MSEWELILKW MPKMLQGAAL TLELLAIAVV AGLALALPLG IARASRHWYV RAVPYAYIFF 
FRGTPLLLQL FIVYYGLAQF EEVRKSAFWP YLRDPYWCAL LTMTLHTAAY IAEILRGAIH
SVPVGEVEAA RALGMSRRQA LWHIILPRAV RIGLPAYSNE VILMLKASAV VYTVTLFDIM
GMARTIIART YESMLFFCLA GALYLVITIV LTRIFRLIER WLRVDATQGR