Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_67890 |
Symbol | hisA |
ID | 4383453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6061562 |
End bp | 6062299 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639328075 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_793611 |
Protein GI | 116053288 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.640781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.063484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCA TTCCCGCGAT CGACTTGAAA GACGGCGCCT GCGTGCGTCT GCGCCAGGGC CTGATGGAAG ACGCCACGGT CTTCTCCGAC GATCCGGTGG CGATGGCCGC CAAATGGGTC GATGGCGGTT GCCGCCGCTT GCACCTGGTG GACCTGAACG GCGCTTTCGA AGGCAAGCCG GTCAACGGCG AGGTGGTCAC CGCCATCGCC CGTCGCTACC CGGACCTGCC GATCCAGATC GGTGGCGGCA TCCGCTCGCT GGAAACCATC GAGCATTACG TTCGCGCCGG CGTCAGCTAC GTCATCATCG GCACCAAGGC GGTCAAGCAG CCTGAGTTCG TCGGCGAGGC CTGCCGCGCC TTCCCGGGCA AGGTCATCGT CGGCCTGGAT GCCAAGGACG GTTTCGTCGC CACCGACGGC TGGGCCGAGG TCAGCGAAGT CCAGGTGATC GACCTGGCCC GTCGCTTCGA GGCCGACGGG GTGTCCGCCA TCGTCTACAC GGATATCTCC AAGGACGGCA TGATGCAGGG CTGCAACGTC GAGGCTACCG CCGCGCTGGC CAATGCCACG CGGATTCCGG TGATCGCCTC CGGCGGCATC CACAATCTCG GCGACATCCA GAAGCTGCTG GACGCCCGCA CCCCGGGGAT CATCGGCGCC ATCACCGGCC GGGCGATCTA CGAAGGCACC CTGGACGTGG CCGAAGCCCA GGCGCTGTGC GACAACTTCA AGGCCTGA
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Protein sequence | MLIIPAIDLK DGACVRLRQG LMEDATVFSD DPVAMAAKWV DGGCRRLHLV DLNGAFEGKP VNGEVVTAIA RRYPDLPIQI GGGIRSLETI EHYVRAGVSY VIIGTKAVKQ PEFVGEACRA FPGKVIVGLD AKDGFVATDG WAEVSEVQVI DLARRFEADG VSAIVYTDIS KDGMMQGCNV EATAALANAT RIPVIASGGI HNLGDIQKLL DARTPGIIGA ITGRAIYEGT LDVAEAQALC DNFKA
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