Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_67880 |
Symbol | hisF1 |
ID | 4383452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 6060781 |
End bp | 6061551 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328074 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_793610 |
Protein GI | 116053287 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.212449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGG CAAAACGCAT CATCCCCTGC CTCGACGTGG ACAATGGCCG AGTGGTCAAG GGCGTCAAGT TCGAGAACAT CCGCGACGCC GGCGATCCGG TCGAGATCGC CCGCCGCTAC GATGAGCAGG GTGCCGACGA GATCACCTTC CTCGACATCA CCGCCAGCGT CGACGGGCGC GACACCACCC TGCATACCGT CGAGCGCATG GCCAGTCAGG TGTTCATTCC GCTGACCGTG GGCGGCGGCG TACGCAGCGT GCAGGACATC CGCAACCTGT TGAATGCCGG CGCGGACAAG GTCTCGATCA ACACCGCCGC GGTGTTCAAC CCCGAGTTCG TCGGCGAGGC CGCCGACCGC TTCGGCTCGC AGTGCATCGT GGTCGCCATC GATGCGAAGA AGGTTTCCGC CCCGGGCGAG GCGCCGCGCT GGGAAATCTT CACCCATGGC GGGCGCAAGC CCACCGGGCT GGATGCCGTG CTCTGGGCGA AGAAGATGGA AGACCTGGGC GCCGGCGAGA TTCTCCTGAC CAGCATGGAC CAGGACGGCG TGAAGAGCGG TTACGACCTG GGCGTGACCC GCGCCATCAG CGAGGCGGTG AACGTACCGG TGATTGCTTC CGGCGGCGTC GGCAACCTGG AGCACCTGGC CGCCGGCATC CTCGAGGGCA AGGCCGACGC GGTGCTCGCG GCGAGCATCT TCCACTTCGG CGAGTACACC GTGCCGGAAG CCAAGGCCTA CCTCGCCAGC CGCGGTATCG TGGTGCGCTG A
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Protein sequence | MALAKRIIPC LDVDNGRVVK GVKFENIRDA GDPVEIARRY DEQGADEITF LDITASVDGR DTTLHTVERM ASQVFIPLTV GGGVRSVQDI RNLLNAGADK VSINTAAVFN PEFVGEAADR FGSQCIVVAI DAKKVSAPGE APRWEIFTHG GRKPTGLDAV LWAKKMEDLG AGEILLTSMD QDGVKSGYDL GVTRAISEAV NVPVIASGGV GNLEHLAAGI LEGKADAVLA ASIFHFGEYT VPEAKAYLAS RGIVVR
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