| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_67850 |
|---|
| Symbol | |
|---|
| ID | 4383450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6059020 |
|---|
| End bp | 6059772 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639328072 |
|---|
| Product | putative ABC-type amino acid transport protein, periplasmic component |
|---|
| Protein accession | YP_793608 |
|---|
| Protein GI | 116053285 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.349677 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAA GCCTGCTCTT CGCGCTGCTC GCAACCCTGC TGTTGGTCGG CGGCGCGCGC
GCCGAAACCG ATCCCGACTA CAGCATGGTC CTGCTCACGG AGAACTTCCC GCCGTACAAC
ATGGCGATCA ACGGCAAGAA CTTCGCCCAG GAAGACAACA TCGACGGCAT CGCCGTGGAT
ATCGTCCGCG AGATGTTCAA GCGCGCCGGC ATCAAGTACA GCCTGACCCT GCGTTTCCCC
TGGGACCGCA TCTACAAGCT GGCGCTGGAG AAGCCCGGCT ACGGGGTGTT CGTCACCGCC
CGCCTGGCCG AGCGCGAGGA CAAGTTCAAG TGGGTCGGTC CGATCGGCCC GGACGACTGG
GTGCTGCTGG CCAAGGGCGA CAGCCCGATC ACCCTGGGCA GCCTGGACGA GGCGAAGAAA
TACCGGATCG GCGCCTACAA GGGCGATGCC ATCGCCGAGT TCCTCGGCAA GAACGGTTTC
GAGGCCGACC TGGCGCTACG CGACCAGGAA AACGCGCAGA AGCTGGTCAA GGGCCAGATC
GACCTCTGGG CCAGCGGCGA TCCTGCCGGG CGCTACCTGG CCAAGCAGGA AGGCGTGACC
GGCCTGAAGA CGGTGCTGCG CTTCAACAGC GACCAGCTGT ACCTGGCGCT CAACCGCGAG
ACTCCCGACG AAGTGGTGCA GAAGCTCCAG GCAGCCCTGG ACGGCATGCG CAAGGAAGGC
TTCGTCGAGG ACATCCTCAA CAGCTATCTC TGA
|
|---|
| Protein sequence | MQRSLLFALL ATLLLVGGAR AETDPDYSMV LLTENFPPYN MAINGKNFAQ EDNIDGIAVD
IVREMFKRAG IKYSLTLRFP WDRIYKLALE KPGYGVFVTA RLAEREDKFK WVGPIGPDDW
VLLAKGDSPI TLGSLDEAKK YRIGAYKGDA IAEFLGKNGF EADLALRDQE NAQKLVKGQI
DLWASGDPAG RYLAKQEGVT GLKTVLRFNS DQLYLALNRE TPDEVVQKLQ AALDGMRKEG
FVEDILNSYL
|
|---|
| |