| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_67710 |
|---|
| Symbol | |
|---|
| ID | 4383438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 6048249 |
|---|
| End bp | 6048710 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639328061 |
|---|
| Product | putative rRNA methylase |
|---|
| Protein accession | YP_793597 |
|---|
| Protein GI | 116053273 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00000281538 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.793348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCACG TCATCCTGTT TCAACCGGAG ATTCCTCCGA ATACCGGCAA CATTATCAGG
CTCTGCGCCA ACGCCGGATG CAGTCTGCAC CTGATCGAGC CGCTCGGTTT CGAACTGGAC
GACAAGCGCT TGCGCCGTGC CGGCCTCGAC TACCACGAAT ACGCCAGCGT ACGCCGCTAC
CCGGATCTGC AGAGCTGCCT CGAGGCCCTC GGCCAGTCAC GCCTATTCGC CTTCACCACC
AAGGGGTCGC GGGCCTTCCA CGAAGTGGCC TACCAGCGCG GCGATGCCTT CCTCTTCGGC
CCGGAAAGCC GCGGACTGCC GGAGGACGTG CGCAACGCCC TGCCAACCGA TCGGCGCCTG
CGCCTGCCGA TGCGCGAAGG CTGCCGTAGC CTGAACCTGT CCAACACGGT GGCGGTGACC
GTCTACGAAG CCTGGCGCCA GCTCGGCTTC GCCATGGACT GA
|
|---|
| Protein sequence | MFHVILFQPE IPPNTGNIIR LCANAGCSLH LIEPLGFELD DKRLRRAGLD YHEYASVRRY
PDLQSCLEAL GQSRLFAFTT KGSRAFHEVA YQRGDAFLFG PESRGLPEDV RNALPTDRRL
RLPMREGCRS LNLSNTVAVT VYEAWRQLGF AMD
|
|---|
| |