| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_67670 |
|---|
| Symbol | ntrB |
|---|
| ID | 4383436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 6044551 |
|---|
| End bp | 6045627 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639328058 |
|---|
| Product | two-component sensor NtrB |
|---|
| Protein accession | YP_793594 |
|---|
| Protein GI | 116053271 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCG ATACCCTGCA CCGACTGTTG CTCGACAACC TGACCACCGC GGTGATCCTG
CTCAACGGCG AACTGCGCCT GGAGTACATG AACCCGGCAG CGGAGATGCT CCTGGCCGTG
AGCGGCCAGC GCAGCCACGG GCAATTCATC AGCGAGCTGT TCACCGAATC GCCGGAAGCC
TTGAACTCGC TGCGCCAGGC GGTGGAACAG GCGCATCCGT TCACCAAGCG CGAAGCGACC
CTGACCTCTA TCACCGGCGT CAGCATCACG GTCGACTATG CGGTGACGCC CATCCTCAAC
CGCAACGAGA CGCTGCTGCT GCTCGAGGTC CATCCGCGCG ACCGGCTGAT GCGGATCACC
CGCGAAGAAG CACAGCTGTC CAAACAGGAG ACCACCAAGC TGCTGGTGCG CGGGCTCGCC
CACGAGATCA AGAACCCGCT CGGCGGCATC CGCGGCGCAG CGCAACTACT ATCCCGCGAG
CTGCCGGAAG AGTCGCTGAA GGACTACACC AACGTCATCA TCGAAGAAGC CGACCGGTTG
CGGAACCTGG TGGACCGCAT GCTCGGCTCG AACAAACTGC CGAACCTGGC GCCGACCAAC
ATCCATGAAG TGCTGGAGCG GGTCAGCAGC CTGGTGGAAG CGGAGAGCCA GGGCAGCATC
ACCCTGGTCC GCGACTACGA CCCGAGCATC CCCGACCTGC TGCTCGACCG CGAGCAAATG
ATCCAGGCCG TGCTCAACAT GGTACGCAAC GCCATGCAGG CGATCGCCGG GCAGAACGAC
CTGCGCCTCG GTCGCATCAC CCTGCGCAGC CGTACCCTGC GCCAGTTCAC CATCGGCCAC
ACGCGTCACC GCCTGGTGTG CAAGGTGGAG ATCATCGACA ACGGCCCGGG CATTCCGGCC
GAGCTCCAGG AAACCATCTT CTACCCCATG GTCAGCGGCC GTCCGGACGG TACCGGACTC
GGCCTGGCCA TCGCCCAGAA CATCATCAGC CAGCACCAGG GGCTGATTGA ATGCGAGAGC
CACCCCGGCC ATACCGTGTT CAGTCTGTTC CTGCCCCTGG AACAAGGAGT GCATTGA
|
|---|
| Protein sequence | MPTDTLHRLL LDNLTTAVIL LNGELRLEYM NPAAEMLLAV SGQRSHGQFI SELFTESPEA
LNSLRQAVEQ AHPFTKREAT LTSITGVSIT VDYAVTPILN RNETLLLLEV HPRDRLMRIT
REEAQLSKQE TTKLLVRGLA HEIKNPLGGI RGAAQLLSRE LPEESLKDYT NVIIEEADRL
RNLVDRMLGS NKLPNLAPTN IHEVLERVSS LVEAESQGSI TLVRDYDPSI PDLLLDREQM
IQAVLNMVRN AMQAIAGQND LRLGRITLRS RTLRQFTIGH TRHRLVCKVE IIDNGPGIPA
ELQETIFYPM VSGRPDGTGL GLAIAQNIIS QHQGLIECES HPGHTVFSLF LPLEQGVH
|
|---|
| |