Gene PA14_67560 details

Gene Information

• Locus tag: PA14_67560
• Symbol: typA
• ID: 4383429
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa UCBPP-PA14
• Kingdom: Bacteria
• Replicon accession: NC_008463
• Strand: -
• Start bp: 6034912
• End bp: 6036729
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639328051
• Product: GTP-binding protein TypA/BipA
• Protein accession: YP_793587
• Protein GI: 116053264
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.24734
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 51
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCGAAA ATCTGCGCAA CATCGCCATC ATCGCCCACG TCGACCATGG CAAGACCACC 
CTGGTGGACA AGCTGCTGAA GCTGTCCGGC ACCCTCGACC GCAAAGAAGC GGAAAGCGAG 
CGGGTGATGG ACTCCAACGA CCAGGAAAAA GAGCGTGGCA TCACCATCCT GGCGAAGAAC 
ACCGCGATCA AGTGGAACGG CTACAACATC AACATCGTCG ACACCCCCGG TCATGCCGAC 
TTCGGCGGCG AGGTGGAGCG CGTGATGTCG ATGGTCGACT CCGTGCTGCT GGTGGTCGAC 
GCCCAGGACG GCCCCATGCC GCAGACCCGC TTCGTGACCC AGAAGGCCTT CAAGGCCGGC 
CTGCGTCCGA TCGTGGTGGT GAACAAGATC GACCGTCCGG GCGCGCGTCC GGACTGGGTC 
ATCGACCAGA TCTTCGACCT GTTCGACAAC CTCGGCGCCA CCGACGAGCA ACTCGACTTC 
CCGATCGTCT ACGCCAGCGC CCTGAACGGC ATCGCCGGCC TCGACCACGA GAAGATGGAC 
GACAACATGG ACGCGCTGTT CCAGGCGATC ATCGACCACG TCCCGGCCCC GGTGGTGGAC 
ACCGAGGGTC CGTTCCAGAT GCAGATCTCG CAGCTGGACT ACAACAGCTT CCTCGGCGTG 
ATCGGTATCG GCCGCATCAC CCGCGGCAAG GTCAAGTCCA ACACCCCGGT GGTGGCCATC 
AGCGACGACG GCAGCAAGCG CAACGGCCGC ATCCTGAAGA TCATGGGCCA CCACGGCCTG 
CAGCGCGTCG AGGTGGCCGA GGCGGAAGCC GGCGACATCG TCTGCGTCAG CGGCATGGAG 
GAGCTGTTCA TCTCCGATAC CCTGTGCGAC CCGCAGAACG TCGAGGCGCT GCCGCCGCTG 
ACCGTCGACC AGCCGACCGT GAGCATGACC TTCCAGGTCA ACGATTCGCC GTTCGCCGGC 
CGCGAAGGCA AGTTCGTCAC CAGCCGCAAC ATCAAGGAGC GCCTGGAGAA GGAACTGCTG 
CATAACGTGG CGCTGCGCGT CGAGCCGGGC GACAGCCCGG AGAAGTTCAA GGTTTCCGGC 
CGTGGCGAAC TGCACCTGTC GGTACTGATC GAGACCATGC GCCGCGAAGG CTTCGAGCTG 
GCCGTGGGCC GCCCGGAAGT GGTGATCATC GAGAAGGACG GCGAGAAGCA GGAGCCCTAC 
GAGAACGTCA CCATCGACAT CGAGGAGCAG CACCAGGGCT CGGTGATGGA GCAGATGGGC 
CTGCGCAAGG GCGACCTGAG CAACATGATT CCCGACGGCA AGGGCCGCGT GCGCCTGGAG 
TACACCATTC CGGCGCGCGG CCTGATCGGC TTCCGCAACA ACTTCCTGAC CCTGACCTCG 
GGCACCGGCA TCCTGACCTC GACCTTCAGC CACTACGGTC CGATCAAGGC CGGCGAAGTC 
AGCAACCGCC AGAACGGCGT ACTGGTCTCC ATGGCCACCG GCACCGCCCT GACCTACTCG 
CTGGAGACCC TGCAGAGCCG CGGCAAGCTG TTCCTCGGCC CGGGCGACGA AATCTACGAA 
GGCCAGTTGG CCGGCATCAA CAGCCGTGAC AACGATCTGG TGATCAACCC GACCAAGGGC 
AAGAAGCTCG ACAACATGCG CGCTTCCGGC AAGGACGAAG TCATCGCCCT GGTTCCGCCG 
ATCCGCTTCA CCCTCGAGCA GGCGCTGGAG TTCATCGCCG ACGACGAGCT GGTGGAAGTG 
ACGCCGAAGT CGATCCGCCT GCGCAAGAAG ATGCTCAACG AGAACGACCG CAAGCGCTAC 
GAGCGCAGCA AGGTCTAA 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLKLSG TLDRKEAESE RVMDSNDQEK ERGITILAKN 
TAIKWNGYNI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AQDGPMPQTR FVTQKAFKAG 
LRPIVVVNKI DRPGARPDWV IDQIFDLFDN LGATDEQLDF PIVYASALNG IAGLDHEKMD 
DNMDALFQAI IDHVPAPVVD TEGPFQMQIS QLDYNSFLGV IGIGRITRGK VKSNTPVVAI 
SDDGSKRNGR ILKIMGHHGL QRVEVAEAEA GDIVCVSGME ELFISDTLCD PQNVEALPPL 
TVDQPTVSMT FQVNDSPFAG REGKFVTSRN IKERLEKELL HNVALRVEPG DSPEKFKVSG 
RGELHLSVLI ETMRREGFEL AVGRPEVVII EKDGEKQEPY ENVTIDIEEQ HQGSVMEQMG 
LRKGDLSNMI PDGKGRVRLE YTIPARGLIG FRNNFLTLTS GTGILTSTFS HYGPIKAGEV 
SNRQNGVLVS MATGTALTYS LETLQSRGKL FLGPGDEIYE GQLAGINSRD NDLVINPTKG 
KKLDNMRASG KDEVIALVPP IRFTLEQALE FIADDELVEV TPKSIRLRKK MLNENDRKRY 
ERSKV