| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_67180 |
|---|
| Symbol | |
|---|
| ID | 4383397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5995985 |
|---|
| End bp | 5996854 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639328019 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_793555 |
|---|
| Protein GI | 116053232 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00804523 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG GACTTTGGGT CGTGCTCTGT CTTGCAGGCG TCCGCGTGAT GGCCAACAGC
AAATCGTTTG TCTGCGTTAA TGAAAAAGAC CATCTGCCGC CGTTGGATTC GCAAACCGAT
GCTTGGTACC GCGAAGCAGC CGCCTTGGCC AAGCCCGATA CTCTGCGGCC CTGGGGCCGT
ATCGTCGAGC TTTACAGTAA GGCAGTGGAG CGCGGCCATT GGAAGGCCAT GCATAATTTG
GCGAATCTTT ATCGTACAGG GTGGCCCGGA GGAGTAGAAA AAGATACGCA GAAGGCATTG
GATCTCTATC AAAAGATGAT AGATCTGGAT GTGCCTCAGG GGTTCTATGA TATGGGAGCA
ATGATTGGAA ATCGCGCCGG GGTTAAAAAC CCTGCAACTG ACGGACTTAC TTTCCTTGAT
AAGGCTGCTA GCCTAGGAAA TCCGCCGGCA CTAACTGAAC TAGGTAAGCT TTATATATAT
GTGGCCAAAA AAAAGGATTT GGGGTTGGCG TATACTCACT GTGCTGCTAG TCAGGGTTAT
GCGCCGGCTA GTTATGAGCT GGGGGCGTAT TACAAGATAG TAGAACACAA TTTCCCAAAG
GCACTGGTTT ATTATCAGGT GTCAGTCTCT CAGGGGGGCA AGAGTGCGGC TTTTTTCCTA
TCACGAGTCT TCGGAAGTGA GACTCCCCCT GCAAGTGCAA TGTGGTACGC CCCCGACGAA
AAGTTGCGAG AAGCGTATTA TTCAATCTAC AAAAAGCTTG AAGCTGACCC CGACTTACGT
TTCCCCAATC TGATAGAGGA CTATCCTCTG CCTCCTCATC CCACCCAGGG CTACGACGCG
GACCGCCCAG ACTGGAAGCC GGAGCGGTAA
|
|---|
| Protein sequence | MAIGLWVVLC LAGVRVMANS KSFVCVNEKD HLPPLDSQTD AWYREAAALA KPDTLRPWGR
IVELYSKAVE RGHWKAMHNL ANLYRTGWPG GVEKDTQKAL DLYQKMIDLD VPQGFYDMGA
MIGNRAGVKN PATDGLTFLD KAASLGNPPA LTELGKLYIY VAKKKDLGLA YTHCAASQGY
APASYELGAY YKIVEHNFPK ALVYYQVSVS QGGKSAAFFL SRVFGSETPP ASAMWYAPDE
KLREAYYSIY KKLEADPDLR FPNLIEDYPL PPHPTQGYDA DRPDWKPER
|
|---|
| |