Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_66510 |
Symbol | |
ID | 4385453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5931759 |
End bp | 5933075 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327963 |
Product | putative MFS transporter |
Protein accession | YP_793499 |
Protein GI | 116053178 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAATC CGCAAGTCCG GCCACAGGCC GAAGAAGAAC CCGCGTTAAT CGAGGCGGCC CGCGAAGCAG CCAACGAGGT GCTGGAAGCC GCCACCGAAG TCGAACGCTA TATCGAAAAA GGCACCCCGC AGTTCATGCG CACCTCCCTG GCGCTGTTCT CCGGCGGTTT CGCCACCTTT GCCCTGCTCT ACTGCATCCA GCCGATGATG CCGGTGCTGT CCAAGGCGTT TTCCATCAGC GCCGCGGAAA GCAGCCTGGC ATTGTCCGTC GCCACCGCCA TGCTCGCCCT TGGCCTGCTG GTCACCGGCC CGATCTCCGA CGCGATCGGC CGCAAGCCGG TGATGGTCGT CTCGCTGCTG GCCGCCGCGC TGTTCACCCT CGGCAGCGCG GTGATGCCCA CCTGGCATGG CGTGCTGCTG ATGCGCGCGC TGGTCGGGCT GTCCTTGAGC GGCCTGGCCG CGGTGGCGAT GACCTATCTC AGCGAAGAGA TCCATCCGCA GCACATCGGC TTGTCGATGG GCCTGTACAT CGGCGGCAAC GCCATCGGCG GGATGAGCGG ACGCCTGATC AGCGGCGTCC TGGTCGATTT CATCTCCTGG CATGCCGCAC TGGCGGTCCT CGGCGGCCTG GCCCTGGTCG CCGCGCTGGT GTTCTGGCGC GTGCTGCCCG AATCGAAACA CTTCCGGCCG GCACCGCTGA AGCCGGCGAC CCTGCTCAAC GGCTACCGCT TGCACTTCCG CGACGCCGGA CTGCCCTGGC TGTTCCTGAT CGGCTTCCTG CTGATGGGCA GCTTCGTCAC CCTGTTCAAC TACATCGGCT ACCGCCTGCT GGCCGAGCCC TACCACATGA GCCAGGCGGT GGTCGGCGTG CTCTCGGTGG TTTACCTCTC GGGCATCTAC AGCTCGGCCT GGGTCGGTTC GCTGGCCGAC AAGCTGGGGC GACGCAAGGT GCTCTGGGCG GTCATCCTGC TGATGCTCGG CGGCCTGCTG CTGACCCTGT TCGAGCCGAT CCCGCTGATG CTCGCCGGCC TGCTGCTGTT CACCTTCGGC TTCTTCGGCG CGCACTCGGT GGCGAGCAGT TGGATCGGGC GCCGCGCCCT GCGCGCCAAG GGCCAGGCCT CGTCGCTCTA TCTGTTCAGC TACTACGTCG GCTCGAGCCT GGCCGGCACC CTCGGCGGGG TGTTCTGGCA TTACTACGGC TGGAACGGCA TCGGGCTGTT CATCGGCTCG CTGCTGGTGG TCGCGGTATT GGTCTCGCTG CACCTGGCGC GCCTGCCGGC CCTGCCTGGC AACACCCTGG CGCAGCCCGC CCACTGA
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Protein sequence | MSNPQVRPQA EEEPALIEAA REAANEVLEA ATEVERYIEK GTPQFMRTSL ALFSGGFATF ALLYCIQPMM PVLSKAFSIS AAESSLALSV ATAMLALGLL VTGPISDAIG RKPVMVVSLL AAALFTLGSA VMPTWHGVLL MRALVGLSLS GLAAVAMTYL SEEIHPQHIG LSMGLYIGGN AIGGMSGRLI SGVLVDFISW HAALAVLGGL ALVAALVFWR VLPESKHFRP APLKPATLLN GYRLHFRDAG LPWLFLIGFL LMGSFVTLFN YIGYRLLAEP YHMSQAVVGV LSVVYLSGIY SSAWVGSLAD KLGRRKVLWA VILLMLGGLL LTLFEPIPLM LAGLLLFTFG FFGAHSVASS WIGRRALRAK GQASSLYLFS YYVGSSLAGT LGGVFWHYYG WNGIGLFIGS LLVVAVLVSL HLARLPALPG NTLAQPAH
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