Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65990 |
Symbol | qacH |
ID | 4382254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5877500 |
End bp | 5877832 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327923 |
Product | SMR multidrug efflux transporter |
Protein accession | YP_793459 |
Protein GI | 116053138 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.00317706 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATT ATCTCTACCT CGCCATCGCC ATCGCCGCCG AAGTGGTCGC CACCACCTCG CTGAAAGCCG TCGCCGGATT CAGCAAGCCA CTGCCGCTGC TGCTGGTGGT GGGCGGCTAC GTGCTCGCCT TCAGCATGCT CGTGCTGGTC ATGCGCACCC TGCCGGTCGG CGTGGTCTAC GCCATCTGGT CCGGGCTCGG CATCGTCCTG GTCAGCCTGG TGGCGATGTT CGTCTACGGC CAGCGCCTGG ACCCCGCGGC CCTCCTCGGT ATCGGCCTGA TCATCGCCGG CGTGCTGGTG ATCCAGTTGT TCTCCCGCGC TTCGGGGCAC TGA
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Protein sequence | MTNYLYLAIA IAAEVVATTS LKAVAGFSKP LPLLLVVGGY VLAFSMLVLV MRTLPVGVVY AIWSGLGIVL VSLVAMFVYG QRLDPAALLG IGLIIAGVLV IQLFSRASGH
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