Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_65970 |
Symbol | |
ID | 4382253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5876531 |
End bp | 5877415 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639327922 |
Product | putative transcriptional regulator |
Protein accession | YP_793458 |
Protein GI | 116053137 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.238647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTGGA ATCTGGAGCA GATCCGCCTG TTCGTCAGCG TCGCCGAGCG CCAGTCGTTC TCTGCCGCCG CCCGCGAACT GAAGCGGGTG CAATCGGCGG TGAGCAACGG CATCGCGCTG CTGGAGGCGG ACCTCGGCGT CACCCTGTTC GAACGCAGCA GCGGACGCCA GCCGCGCCTG ACCGACGAGG GCCGGGTGCT GCTGGCGGAG GCGCGCGAGG TGCTGCGCCA GTGCGAGCGC CTGCAGGGGC GCGCGCTGGG CCTGGCGCGC GGCGAGGAGC CGCGGCTGCG CCTGGCCCAG GACGAGGCGA TGCCCTACCA GCCGGTGCTG GACAGCCTGG AAGCGCTGGC GCAGCGCTTT CCCAGTCTGG AGGTGCAGGT GTCCAGCGGC GGCCAGGGCG ACGTGACCCG TCGTTTGCTC GAGGAGCAGG CTGACCTCGG CCTGCTGTTC CACCATGAGC GCATGCCTGA GTCGCTGGAG CGGCGGCGCC TCGGCAGCGT CGAGATGGTC ACGGTGTGCG GCGCCGGCCA CCCGCTGGCC GGGCTGCAAC GGGTCAGTCG CCGCGAGCTG GCACAGCACC GGCAACTTTT GATCGTGCCC CAGCAGAGCG GCTATCCGGG CGGCGAGCAG ATCAGCCCGC AGGTGTGGCG GCTGGACAGC TTCTATTCCA TGGCCGAGTT GCTGATGCGC AACCTCGGCT GGGCCTGGCT GCCGCGGCAC GTGGTGCAGT ACCCCACCTA CGACCGGCTG ATGGTGGAGC TGACCAGCGA CTGGACGCCG CCGTCGCTGG TGGTCGAACT GGTCTGGCGG CGCAACGAGG TGCTCGGCCC GGCGGCGGCC TGGCTCGGCG AAACCTTCAC CCGCCACCTG CGCGCCATCG GCTGA
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Protein sequence | MQWNLEQIRL FVSVAERQSF SAAARELKRV QSAVSNGIAL LEADLGVTLF ERSSGRQPRL TDEGRVLLAE AREVLRQCER LQGRALGLAR GEEPRLRLAQ DEAMPYQPVL DSLEALAQRF PSLEVQVSSG GQGDVTRRLL EEQADLGLLF HHERMPESLE RRRLGSVEMV TVCGAGHPLA GLQRVSRREL AQHRQLLIVP QQSGYPGGEQ ISPQVWRLDS FYSMAELLMR NLGWAWLPRH VVQYPTYDRL MVELTSDWTP PSLVVELVWR RNEVLGPAAA WLGETFTRHL RAIG
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