| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_65880 |
|---|
| Symbol | |
|---|
| ID | 4382247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5869705 |
|---|
| End bp | 5870439 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639327916 |
|---|
| Product | putative two-component response regulator |
|---|
| Protein accession | YP_793452 |
|---|
| Protein GI | 116053131 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0780512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGG TTCCGCGCGT ATTGGTGGTC GACGACGACC CGGTGATTCG TGAGCTTCTC
CAGGCCTATC TCGGCGAGGA GGGCTATGAC GTCCTCTGCG CCGGCAACGC CGAGCAGGCG
GAAGCCTGCC TTGCCGAGTG CGCCCATCTC GGCCAGCCGG TCGAGCTGGT GCTGCTGGAC
ATCCGCCTGC CCGGCAAGGA CGGCCTGACC CTGACCCGCG AGCTGCGGGT GCGCTCCGAG
GTGGGGATCA TCCTGATCAC CGGGCGCAAC GACGAGATCG ATCGCATCGT CGGCCTGGAG
TGCGGCGCCG ACGACTACGT GATCAAGCCG CTGAACCCGC GCGAACTGGT GTCGCGGGCG
AAGAACCTGA TCCGCCGGGT GCGCCATGCC CAGGCCAGCG CCGCCCCCGC CCGGCAGGCC
CTCAGGCAGT TCGGCGACTG GCTGCTGGAC GCCGACCGGC GCCGCCTGAT CGACCACGCG
GGCAACGAGA CCCTGCTCAC CCACGGCGAA TTCCAATTGC TCGGCGCCTT CCTGCGCAAC
AGCGGGCATA CCCTGAGCCG CGACCAGTTG ATGGACCAGA TCCGCAACCG CGAGTGGCTG
CCCAGCGATC GCTCCATCGA CGTGCTGGTC GGCCGCCTGC GTCGTAAGCT GCGCGACGAC
CCGGCCGAAC CGCAACTGAT CATCACCATC CACGGCGCCG GCTACCTGTT CACCGCCGCG
GCCAGCGACG CCTGA
|
|---|
| Protein sequence | MAMVPRVLVV DDDPVIRELL QAYLGEEGYD VLCAGNAEQA EACLAECAHL GQPVELVLLD
IRLPGKDGLT LTRELRVRSE VGIILITGRN DEIDRIVGLE CGADDYVIKP LNPRELVSRA
KNLIRRVRHA QASAAPARQA LRQFGDWLLD ADRRRLIDHA GNETLLTHGE FQLLGAFLRN
SGHTLSRDQL MDQIRNREWL PSDRSIDVLV GRLRRKLRDD PAEPQLIITI HGAGYLFTAA
ASDA
|
|---|
| |