| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_65740 |
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| Symbol | thiC |
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| ID | 4384817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5853158 |
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| End bp | 5855041 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639327905 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_793441 |
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| Protein GI | 116053121 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA CGCAGAAGAA CAACATCACC CGCCTTGAGC AGCTCGACCG CCAGTCGACG
CAGCCTTTCC CGAACTCGCG CAAGGTCTAC CTGACCGGCT CGCGCCCGGA CATCCGCGTC
CCGGTGCGGG AAATCTCCCT CGCCGACACC CCCACCGCCT TCGGCGGCGA AAAGAACCCG
CCGGTGTTCG TCTACGACAC CTCCGGCCCG TATACCGACC CCGAGGTCCG CATCGATCTG
CGCAAGGGAC TGCCTGACGT GCGTTCGCGC TGGATCGACG AGCGCGGCGA CACCGAGATC
CTCCCAGGCC TGACCTCCGA GTTCGGCCAG GCCCGCCTGG CCGACGCCAG CCTCGACGCC
CTGCGCTTCG CCCACGTGCG CACGCCGCGC CGGGCCAAGC CGGGCGCCAA CGTCTCGCAG
ATGCACTACG CGAAGAAGGG CATCATCACC CCGGAGATGG AATACATCGC CATCCGCGAG
AACATGAAGC TGCAGGAAGC CCGGGCCGCC GGCCTGCTCG ACCAGCAGCA CCCGGGGCAC
AGCTTCGGTG CCAACACCCC GAAGGAAATC ACCCCCGAGT TCGTCCGCGA GGAAGTCGCC
CGCGGCCGCG CGATCATTCC GGCGAACATC AACCACACCG AGCTTGAGCC GATGATCATC
GGCCGCAATT TCCTGGTGAA GATCAACGGC AACATCGGCA ACAGCGCGCT GGGCTCGTCG
ATCGAGGAAG AAGTGGAGAA GCTCACCTGG GGCATCCGCT GGGGCGCCGA CACGGTGATG
GACCTGTCCA CCGGCAAGCA CATCCATGAA ACCCGCGAGT GGATCCTGCG CAACAGCCCG
GTACCGATCG GCACCGTACC GATCTACCAG GCGCTGGAGA AGGTCAACGG CGTCGCCGAG
GACCTGACCT GGGAAATCTT CCGCGATACC CTGATCGAAC AGGCCGAGCA GGGCGTCGAC
TACTTCACCA TCCACGCCGG CGTGCTGCTG CGCTATGTGC CGCTGACCGC CAAGCGGGTC
ACCGGCATCG TTTCCCGCGG CGGCTCGATC ATGGCCAAGT GGTGCCTGGC GCACCACCAG
GAGAACTTCC TCTACACGCA TTTCGAAGAG ATCTGCGAAA TCATGAAGGC CTACGACGTC
AGCTTCTCGC TGGGCGATGG CCTGCGTCCG GGCTCGGTGG CCGACGCCAA CGACGCCGCC
CAGTTCGGCG AGCTGGAAAC CCTCGGCGAG CTGACCAAGA TCGCCTGGAA GCACGACGTG
CAGGTGATGA TCGAAGGCCC CGGCCACGTG CCGATGCAAT TGATCAAGGA AAACATGGAC
AAGCAGCTGG AGTGCTGCGA CGAGGCGCCG TTCTACACCC TCGGCCCGCT GACCACCGAC
ATCGCCCCCG GCTACGACCA CATCACCTCC GGCATCGGCG CGGCGATGAT CGGCTGGTTC
GGCTGCGCCA TGCTCTGCTA CGTCACGCCC AAGGAGCACC TGGGTCTGCC GAACAAGGAT
GACGTGAAGA CCGGGATCAT CACCTACAAG ATCGCCGCCC ATGCCGCCGA CCTCGCCAAG
GGCCACCCGG GCGCGCAGAT CCGCGACAAC GCGCTGTCCA AGGCGCGCTT CGAGTTCCGT
TGGGAGGACC AGTTCAACCT TGGCCTGGAC CCGGACACCG CGCGGGCGTT CCATGACGAG
ACCCTGCCGA AGGACTCGGC CAAGGTCGCG CACTTCTGCT CCATGTGCGG ACCGAAGTTC
TGCTCGATGA AGATCACCCA GGAAGTCCGC GACTACGCCA AGGAGAACGG CCTGTCCGAC
GAGAGCAAGG CCATCGAGGC CGGCTTCCAG GAGCAGGCGG CGCGCTTCAA GGACGAAGGA
TCGGTGATCT ACAGGCAGGT GTAG
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| Protein sequence | MSATQKNNIT RLEQLDRQST QPFPNSRKVY LTGSRPDIRV PVREISLADT PTAFGGEKNP
PVFVYDTSGP YTDPEVRIDL RKGLPDVRSR WIDERGDTEI LPGLTSEFGQ ARLADASLDA
LRFAHVRTPR RAKPGANVSQ MHYAKKGIIT PEMEYIAIRE NMKLQEARAA GLLDQQHPGH
SFGANTPKEI TPEFVREEVA RGRAIIPANI NHTELEPMII GRNFLVKING NIGNSALGSS
IEEEVEKLTW GIRWGADTVM DLSTGKHIHE TREWILRNSP VPIGTVPIYQ ALEKVNGVAE
DLTWEIFRDT LIEQAEQGVD YFTIHAGVLL RYVPLTAKRV TGIVSRGGSI MAKWCLAHHQ
ENFLYTHFEE ICEIMKAYDV SFSLGDGLRP GSVADANDAA QFGELETLGE LTKIAWKHDV
QVMIEGPGHV PMQLIKENMD KQLECCDEAP FYTLGPLTTD IAPGYDHITS GIGAAMIGWF
GCAMLCYVTP KEHLGLPNKD DVKTGIITYK IAAHAADLAK GHPGAQIRDN ALSKARFEFR
WEDQFNLGLD PDTARAFHDE TLPKDSAKVA HFCSMCGPKF CSMKITQEVR DYAKENGLSD
ESKAIEAGFQ EQAARFKDEG SVIYRQV
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