Gene PA14_65370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_65370 
SymbolamiB 
ID4384850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5823071 
End bp5824498 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID639327879 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_793415 
Protein GI116053096 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0527105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTGGG GCTTGCGTCT GCGGACGTTG TTGACTGGGG TGATGATTCT GCTGGCCTGC 
CAGGTCGGCG AGGTTCTGGC CGCCGCGCAA ATCAAGAGCG TGCGGATCTG GCGCGCTCCG
GACAACACCC GTCTGGTCTT CGATCTCTCC GGTCCGGTGC AGCACAGCCT GTTCACCCTG
GCCGCACCCA ACCGTATCGT CATCGACGTC AGCGGCGCCC AGCTGGCGAC CCAGCTCAAC
GGTCTCAAGC TCGGCAACAC CCCGATCACC GCGGTGCGCT CCGCCCAGCG CACGCCCAAC
GACCTGCGCA TGGTCCTCGA CCTGTCGGCG CAGGTCACCC CGAAAAGCTT CGTCCTGCCG
CCCAACCAGC AATACGGCAA CCGCCTGGTG GTCGATCTCT ACGACCAGGG CGCCGACCTG
ACCCCGGACG TACCCGCGAC GCCGACCCCG AGCGTGCCGG TCACTCCGGT GACGCCGACC
CAGCCGGTGG CCAAGCTGCC GCTGCCGACC AAGGGCGGTA CCCGCGATAT CGTCATCGCC
ATCGACGCCG GCCACGGCGG TGAAGACCCT GGCGCCCTTG GCCCGGGCGG GCTGCACGAG
AAGAACATCA CCCTGTCGAT CGCTCGCGAG CTGCAACGCC AGATCAACCA GGTGCGCGGT
TACCGGGCCG AGCTGACCCG TACCGGCGAC TACTTCATCC CACTGCGCAA GCGCACCGAG
ATCGCCCGCA AGAAGGGCGC CGACCTGTTC GTCTCGATCC ATGCCGACGC CGCGCCGAGC
CGCAGCGCCT TCGGTGCCTC GGTGTTCGCC CTGTCCGACC GCGGCGCCAC TTCGGAAACC
GCGCGCTGGC TGGCCGACAG CGAGAACCGT TCCGACCTGA TCGGCGGCGA TGGCAGCGTC
AGCCTCGGCG ACAAGGACCA GATGCTCGCC GGCGTGCTGC TCGACCTGTC GATGACCGCC
ACCCTCTCGT CGAGCCTGGA CGTCGGCCAC AAGGTGCTGA CCAATGTCGG CCGCATCACT
TCGCTGCACA AGCGTCGTGT CGAGCAGGCC GGGTTCATGG TGTTGAAGTC GCCGGACATC
CCGTCGATCC TGGTGGAAAC CGGCTTCATC TCGAACGTCA ACGAGTCGCG CAAGCTGGCC
AGCGCCAGCC ATCAGCAGGC CTTGGCGCGT TCGATCACCA GCGGCATCCG CCAGTATTTC
CAGCAGAGCC CGCCGCCCGG CACCTACATC GCCTCTTTGC GCGCCCAGGG CAAGCTCTCC
ATGGGGCCGC GCGAGCACGT GGTGCGGCCC GGAGAGACCC TGGCGATGAT CGCCCAGCGC
TATGAAGTGA GCATGGCCGC GCTGCGCAGC AGCAACAGCC TGCCCAGCGA CAACCTGAAA
GTCGGCCAGG CCCTGTCCAT CCCGAGCACC GCCCTGGCGG CCCAGTGA
 
Protein sequence
MGWGLRLRTL LTGVMILLAC QVGEVLAAAQ IKSVRIWRAP DNTRLVFDLS GPVQHSLFTL 
AAPNRIVIDV SGAQLATQLN GLKLGNTPIT AVRSAQRTPN DLRMVLDLSA QVTPKSFVLP
PNQQYGNRLV VDLYDQGADL TPDVPATPTP SVPVTPVTPT QPVAKLPLPT KGGTRDIVIA
IDAGHGGEDP GALGPGGLHE KNITLSIARE LQRQINQVRG YRAELTRTGD YFIPLRKRTE
IARKKGADLF VSIHADAAPS RSAFGASVFA LSDRGATSET ARWLADSENR SDLIGGDGSV
SLGDKDQMLA GVLLDLSMTA TLSSSLDVGH KVLTNVGRIT SLHKRRVEQA GFMVLKSPDI
PSILVETGFI SNVNESRKLA SASHQQALAR SITSGIRQYF QQSPPPGTYI ASLRAQGKLS
MGPREHVVRP GETLAMIAQR YEVSMAALRS SNSLPSDNLK VGQALSIPST ALAAQ