| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_65310 |
|---|
| Symbol | hfq |
|---|
| ID | 4384847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5819787 |
|---|
| End bp | 5820035 |
|---|
| Gene Length | 249 bp |
|---|
| Protein Length | 82 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639327876 |
|---|
| Product | RNA-binding protein Hfq |
|---|
| Protein accession | YP_793412 |
|---|
| Protein GI | 116053093 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG GGCATTCGCT ACAAGACCCT TACCTCAATA CCCTGCGGAA AGAACGCGTC
CCGGTTTCCA TCTATCTGGT CAACGGCATC AAGCTGCAAG GCCAGATCGA GTCCTTCGAC
CAGTTTGTCA TCCTGCTGAA GAACACCGTC AGCCAGATGG TTTACAAGCA CGCGATCTCC
ACCGTGGTAC CGAGCCGTCC GGTGCGTCTG CCGAGCGGTG ACCAGCCGGC CGAGCCGGGC
AACGCTTGA
|
|---|
| Protein sequence | MSKGHSLQDP YLNTLRKERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPVRL PSGDQPAEPG NA
|
|---|
| |