Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64860 |
Symbol | |
ID | 4384832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5779337 |
End bp | 5780053 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327839 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_793377 |
Protein GI | 116053058 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000027849 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGG CGTTGCTGGA ATTCCGTGAG GTGGACGTGT TCTACGGGCC GATCCAGGCG CTGAAGAAGG TCTCGCTGCA GGTCAACGAG GGCGAGACGG TGAGCCTGAT CGGTGCCAAC GGCGCGGGCA AGTCGACGCT GTTGATGTCG ATCTTCGGCC AGCCGCGCGC GGCGGCCGGG CAGATCCTCT ATCGCGGCCA GGACATCCGC CAGAAGTCGG CGCACTACGT GGCGTCCAAC GGCATCGCGC AGTCGCCGGA AGGACGCCGG GTGTTCCCCG ACATGAGCGT CGAGGAAAAC CTGCTGATGG GTACCATTCC CATCGGCATG GACCACGCCG AGGAGGACAT GCAGCGCATG TTCGAGCTGT TCCCGCGCCT GAAGGAGCGG CGCAACCAGC GCGCCATGAC CATGTCCGGC GGCGAGCAGC AGATGCTCGC CATCGCCCGC GCGCTGATGA GCCGGCCGAA GCTGCTGTTG CTCGACGAGC CCTCCCTGGG CCTGGCGCCG ATCGTGGTCA AGCAGATCTT CCAGACCCTG CGCGAGCTGG CCAGGAGCGG CATGACCATC TTCCTCGTCG AGCAGAACGC CAACCATGCG CTGAAGCTCT CCGATCGCGC CTACGTGATG GTCACCGGGG AAATCCGCAT GAGCGGCAGC GGCGAAGAAC TGCTCGGCAA CCAGGAGGTG CGCAACGCCT ATCTCGGCGG ACATTGA
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Protein sequence | MSAALLEFRE VDVFYGPIQA LKKVSLQVNE GETVSLIGAN GAGKSTLLMS IFGQPRAAAG QILYRGQDIR QKSAHYVASN GIAQSPEGRR VFPDMSVEEN LLMGTIPIGM DHAEEDMQRM FELFPRLKER RNQRAMTMSG GEQQMLAIAR ALMSRPKLLL LDEPSLGLAP IVVKQIFQTL RELARSGMTI FLVEQNANHA LKLSDRAYVM VTGEIRMSGS GEELLGNQEV RNAYLGGH
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