Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64850 |
Symbol | |
ID | 4384831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5778373 |
End bp | 5779266 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639327838 |
Product | ornithine cyclodeaminase |
Protein accession | YP_793376 |
Protein GI | 116053057 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000404548 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCC TGCGCTTTTT CAGCAACGCC GAGGTCGCCG AGCGCCTGTC TTATCCACAA CTGATCGAGG CGTTGCGCAT CGGCCTGGCC AAGCCTTGCA GTGCGCCGCT GCGCAGCTGC CATGCCTTGC CGGGGCAGGC CTCGTTGCTA CAGATGCCGG TGTGGCAGGC CGGCGAGGGG ATCGGCGTGA AACTGGTGAC GGTGTTCCCC GGCAACGGCG CGCGTGGCCT ACCGGCGGTG GCCGCGGTGT TCGCCCTGTT CGACGGCGAA GACGGTCGCC CGCTGGCGTT GCTGGAGGCT TCGGAACTGA CCGCCCGGCG TACCGCCTGC AGCTCGGCGC TGGCCGCCGA CTACCTGGCG CGGGACGATG CGCGGCGCCT GCTGGTGGTC GGCTGCGGAA CCCTGGCTGC GCACATGGTG CGGGCCCACG CCTGCGTGCG CGACTATCGC CACATCGACA TCTGGGGCCG CGATCCGGCC AAGGCCGCCG CGCTGGCCGC CCGGCTGCGC GCGGCGGTGG AGGCGGCCGA CTGCGTCAGT TGCGTTACCA CCTCCCGCGA AGCGCTGGTG CGCGGCGCAT GGCTGAAGCC GGGCGTCCAT CTCGACCTGG TTGGCGCCTT CCTGCCGTCC ATGCGCGAGA CCGACGCCCT GGCGGTGGCG CGCGCGCGGA TCGTGGTGGA CACCCGCGCA GGCGCGCTGG AAGAAGCCGG CGACCTGTTG CAGGCGATCG CCGAAGGCGC CATCGGGCAC GAGGCGATAT CCACCGAACT GCGCGACTTG CTGGGCGGGG CTGGGCGGCG CGGCGATCCC GGGGAAATCA CCCTGTTCAA GTCGGTGGGT TATGCGCTGG AGGACCTGGT CGCCGCGCGC CGGGTTGTGG ATAACGCCGC CTGA
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Protein sequence | MHSLRFFSNA EVAERLSYPQ LIEALRIGLA KPCSAPLRSC HALPGQASLL QMPVWQAGEG IGVKLVTVFP GNGARGLPAV AAVFALFDGE DGRPLALLEA SELTARRTAC SSALAADYLA RDDARRLLVV GCGTLAAHMV RAHACVRDYR HIDIWGRDPA KAAALAARLR AAVEAADCVS CVTTSREALV RGAWLKPGVH LDLVGAFLPS MRETDALAVA RARIVVDTRA GALEEAGDLL QAIAEGAIGH EAISTELRDL LGGAGRRGDP GEITLFKSVG YALEDLVAAR RVVDNAA
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