| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64800 |
|---|
| Symbol | vanA |
|---|
| ID | 4384827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5774457 |
|---|
| End bp | 5775512 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639327834 |
|---|
| Product | vanillate O-demethylase oxygenase subunit |
|---|
| Protein accession | YP_793372 |
|---|
| Protein GI | 116053053 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0565633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCCGA AGAACGCCTG GTACGTGGCC TGCACCCCCG ACGAACTGGC CGGCAAGCCG
CTCGGCCGAC GCATCTGCGA CGAGCCGATG GTTTTCTACC GAGGCGAGGA CGGCCGCGTG
GCGGCCCTCG AGGATTTCTG CCCGCACCGT GGCGCGCCGC TGTCGCTGGG CTTCGTCGAG
GACGGCGTGC TGGTCTGCGG CTACCACGGC CTGGCGATGG GCGAGGACGG TCGCACCCGC
GCGATGCCCG GCCAGCGGGT CCGCGGCTTC CCCTGCATCC GTCGCTTCCC GGTGCAGGAG
CGGCACGGCT TCGTCTGGGT TTGGCCGGGC GCGGAAGAAC AGGCCGACGC CGCGCTGATA
CCCCGCCTGG AATGGGCGGA AAGCCCTGAT TGGGCCTATG GCGGCGGGCT GTACCACATC
CACTGCGACT ATCGCCTGAT GATCGACAAC CTGATGGACC TGACCCACGA GACCTATGTC
CATGCGTCCA GCATCGGCCA GAAGGAAATC GACGAGGCCG CGCCGACCAC GCGGGTGGAA
GGCGACGAGG TGATCACCAG CCGCCACATG CAGAATGTCA TGGCCCCGCC GTTCTGGCGC
ATGGCCCTGC GCGGCAACGG CCTGGCCGAC GACGTGGCGG TGGACCGCTG GCAGATCTGC
CGCTTCACGC CGCCCAGCCA CGTGCTGATC GAGGTCGGCG TGGCCCACGC CGGCCACGGC
GGCTACCAGG CGCCGGCGGA GCGCAAGGCG GCGAGCATCG TGGTCGACTT CATCACCCCG
GAGAGCGCCA CTTCCATCTG GTACTTCTGG GGCATGGCGC GCAACTTCCA GGCCCACGAC
CAGGCGCTCA CCGAGAGCAT TCGCGAAGGC CAGGGAAAGA TCTTCGGCGA AGACCTGGAA
ATGCTCGAAA GCCAGCAGCG CAACCTGCTG CGCCATCCAC GGCGCGACCT GCTGAAACTG
AACATCGACG CCGGCGGCGT GCAGGCCCGG CGCATCATCG AGCGCCTGCT GGCGGACGAG
CGCCAGGCCG CCGCCCCCAA CCGCGCCCAG GCCTGA
|
|---|
| Protein sequence | MFPKNAWYVA CTPDELAGKP LGRRICDEPM VFYRGEDGRV AALEDFCPHR GAPLSLGFVE
DGVLVCGYHG LAMGEDGRTR AMPGQRVRGF PCIRRFPVQE RHGFVWVWPG AEEQADAALI
PRLEWAESPD WAYGGGLYHI HCDYRLMIDN LMDLTHETYV HASSIGQKEI DEAAPTTRVE
GDEVITSRHM QNVMAPPFWR MALRGNGLAD DVAVDRWQIC RFTPPSHVLI EVGVAHAGHG
GYQAPAERKA ASIVVDFITP ESATSIWYFW GMARNFQAHD QALTESIREG QGKIFGEDLE
MLESQQRNLL RHPRRDLLKL NIDAGGVQAR RIIERLLADE RQAAAPNRAQ A
|
|---|
| |