Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64640 |
Symbol | |
ID | 4384871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5757762 |
End bp | 5758391 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327820 |
Product | TetR family transcriptional regulator |
Protein accession | YP_793358 |
Protein GI | 116053039 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0210921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCAC CCCGCGCCGA ACAGAAACAG CAGACCCGCC ACGCGCTGAT GAGCGCCGCG CGCCACCTGA TGGAAAGCGG GCGCGGCTTC GGCAGCCTCA GCCTGCGCGA AGTGACGCGC GCCGCCGGCA TCGTCCCGGC CGGCTTCTAT CGGCACTTCA GCGACATGGA CCAGCTCGGC CTGGCGCTGG TCGCCGAGGT CGACGAGACC TTCCGCGCCA CCCTGCGCGC GGTGCGCCGC AACGAGTTCG AACTGGGCGG GCTGATCGAC GCCTCGGTGC GCATCTTCCT CGACGCGGTC GGCGCCAACC GCTCGCAGTT CCTCTTCCTC GCCCGCGAGC AATACGGCGG CTCGTTGCCG ATCCGCCAGG CCATCGCCAG CCTGCGCCAG CGCATCACCG ACGACCTGGC CGCCGACCTG GCGCTGCTGA ACAAGATGCC GCATCTCGAC GGCGCGGCCC TCGACGTGTT CGCCGACCTG GTGGTGAAGA CCGTCTTCGC CACCCTTCCG GAGCTGATCG ACCCACCCGC CGCCGACCTG CCGCCGCACC TGATGCCGGC CGCGAAGATC ACCCACCAGC TGCGTTTCAT CATGATCGGC GGCAAGCACT GGCACGGCCT GCCCGACTGA
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Protein sequence | MSSPRAEQKQ QTRHALMSAA RHLMESGRGF GSLSLREVTR AAGIVPAGFY RHFSDMDQLG LALVAEVDET FRATLRAVRR NEFELGGLID ASVRIFLDAV GANRSQFLFL AREQYGGSLP IRQAIASLRQ RITDDLAADL ALLNKMPHLD GAALDVFADL VVKTVFATLP ELIDPPAADL PPHLMPAAKI THQLRFIMIG GKHWHGLPD
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