| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_64240 |
|---|
| Symbol | |
|---|
| ID | 4383326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5726098 |
|---|
| End bp | 5726691 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639327785 |
|---|
| Product | MarC family protein |
|---|
| Protein accession | YP_793323 |
|---|
| Protein GI | 116053005 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2095] Multiple antibiotic transporter |
|---|
| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0206769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATTTGC TGTTCAGCGT CTACCTGAAG ATGCTGGTGC TCTATAGCCC CTTCTTCGTG
CTGTCCTGCT TCATCAGTCT CAGCCGCGGC TTCGGCCCGC GCGACCGCAA GCGCATGGCC
TGGCGGGTGG CCCTGGCGGC GCTGATCGCC AGCGTCGCGC TGTACCTGTT CGGCCGCTAC
ATCTTCATCC TCTTCGGTAT CACCGCCGAC GCCTTCCGCA TCGGCGCCGG CAGCGTGCTG
TTCATCTCCG CGCTGGGCAT GGCCCAGGGC CGCGCGGCGG TGCAGAGCGA CAACGTGCAG
CAGGACGTGA CCATCGTCCC GCTGACCATT CCTCTCACCG TCGGCCCCGG GACCATCGGC
GCGCTGCTGG TGATGGGCGT CGGCCAGGGC TGGGAGGCCA AGCTGATCTC CCTGGTGGCG
ATCTTCCTCG CCTGCCTGAC CCTCGGCACC ACGCTCTATC TTTCCGACCG CATCGAACGC
CTGCTTGGCG ACCAGGGCCT GCAGATCGTC AGTCGCCTGA TGGGTCTGTT CGTCTGCGCG
CTGGCGGCGC AGATCATCGT CACCGGCCTG AAGGGTTCGC TGTTCCCAGG CTGA
|
|---|
| Protein sequence | MHLLFSVYLK MLVLYSPFFV LSCFISLSRG FGPRDRKRMA WRVALAALIA SVALYLFGRY
IFILFGITAD AFRIGAGSVL FISALGMAQG RAAVQSDNVQ QDVTIVPLTI PLTVGPGTIG
ALLVMGVGQG WEAKLISLVA IFLACLTLGT TLYLSDRIER LLGDQGLQIV SRLMGLFVCA
LAAQIIVTGL KGSLFPG
|
|---|
| |