Gene PA14_63900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_63900 
Symbol 
ID4383302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5694739 
End bp5695356 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID639327761 
Productputative hemolyin III 
Protein accessionYP_793299 
Protein GI116052981 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCACG GTGAAAGACT CAATGCCTGG ACCCACCTGA TCGGTGCGGT CGCCGCCTGC 
ACCGGCGCCG TCTGGCTGAC GGTCCAGGCG AGCCTCAACG GCAGTCCATG GAAGATCGTC
GGGGTCGGCG TCTACGGCGT CACCCTGACG CTGCTCTACA GCATCTCGAC CGCCTACCAC
AGCGTGCGCG GGCGAGCGAA GGTGGTGATG CGCAAGCTCG ACCACCTGTC CATCTACCTG
CTGATCGCCG GCAGCTACAC GCCTTTCTGC CTGGTCACGC TGCGCGGTCC CTGGGGCTGG
ACGCTGTTCG GCATCGTCTG GGGCCTGGCG GTGCTCGGCA TGCTCCAGGA GATCAAGCCA
CGCTCCGAGG CGCGGGTGCT GTCGGTGGTG ATCTACGCGG TGATGGGCTG GATCGTGCTG
ATCGCGGTGA AACCGCTGCT CGCCGCCCTC GGCAGCGCCG GCTTCACCTG GCTGGCGGCC
GGCGGCGTGC TCTATACCGT AGGGATCGTC TTCTATGCCT ATGACCACCG CTTCCGCCAC
TGGCATGGCA TCTGGCACCT GTTCGTGATC GCCGGCAGCC TCCTCCACTT CGTGGCGATC
TGGCGCTACG TACTCTAG
 
Protein sequence
MYHGERLNAW THLIGAVAAC TGAVWLTVQA SLNGSPWKIV GVGVYGVTLT LLYSISTAYH 
SVRGRAKVVM RKLDHLSIYL LIAGSYTPFC LVTLRGPWGW TLFGIVWGLA VLGMLQEIKP
RSEARVLSVV IYAVMGWIVL IAVKPLLAAL GSAGFTWLAA GGVLYTVGIV FYAYDHRFRH
WHGIWHLFVI AGSLLHFVAI WRYVL