Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63620 |
Symbol | lipC |
ID | 4383281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5672656 |
End bp | 5673585 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327740 |
Product | lipase LipC |
Protein accession | YP_793278 |
Protein GI | 116052960 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA ACAAGACGTT CCTCGCGGCG GCGCTGGTAG CGCTGGCCGC CAGCCTTCCC GTGCACGCTG CGACCGACTA CACCCGCACG CGCTATCCCA TCGTGCTGTC CCACGGTCTG TTCGGCTTCA AGAGCGTCGG CCCGGTGGAC TACTGGCACG CTATCGTGCC GGCCCTGGAG AAGGACGGCG CGAAGGTCTT CGCCACCTCG CAGTCGCCGG TGAACAGCAA CGAGGTGCGC GGCGAACAGC TACTGGCGCA GGTGGAGGAA GTCCTGGCCC TGACCGGCGC GGAGAAAGTC AACCTGATCG GCCACAGCCA GGGCGGCATG ACCGTGCGCT ACGTCGCCGG GGTGGCGCCG CAACTGGTGG CCTCGGTCAC CACCATGGGC ACGCCGCACA AGGGCACGCC GGTAGCCGAC GCGGTGACCG GCTTCAGCGA GTTCCTCGGG CCGATCGGCA CCGAGGTGAT CGCCTCGGCG GTGGAGGCGC TGTTCTCGGT GGTCGACATC GTCGACGGCG GCGAGTGGGT CAAGGGCGAC GCGCTGGCTG CCCTGAACAG TCTCAACACT CCCGGCACCG CGCGGTTCAA CCAGCGCTTC CCGCAGGCGA TCCCGGCCAG CGCCTGTGGC CAGGGCGCGG AGACGGTAGC CGGGGTGCGC TACTACTCGA TGAGCGGCAC CGGCTCCCTG ACCAATGCGC TCGACCCGAG CTCCGCCGGC CTGGCGGTGA CCGGGCTGCT GTTCGGCGAG GCCAACGACG GTCTGGTCGG CCAATGCTCC AGCCACCTGG GCAGCGTGGT GAAGGACAAC TACCGGATGG ACCATCTGGA CGAAGTCAAC CAGTTGCTCG GCCTGGTCAG CCTGTTCGAG AGCGACCCGA CCCAGGTCTA TCGGCAGCAT GCCAATCGCC TCAGGAACGT CGGACTCTGA
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Protein sequence | MNKNKTFLAA ALVALAASLP VHAATDYTRT RYPIVLSHGL FGFKSVGPVD YWHAIVPALE KDGAKVFATS QSPVNSNEVR GEQLLAQVEE VLALTGAEKV NLIGHSQGGM TVRYVAGVAP QLVASVTTMG TPHKGTPVAD AVTGFSEFLG PIGTEVIASA VEALFSVVDI VDGGEWVKGD ALAALNSLNT PGTARFNQRF PQAIPASACG QGAETVAGVR YYSMSGTGSL TNALDPSSAG LAVTGLLFGE ANDGLVGQCS SHLGSVVKDN YRMDHLDEVN QLLGLVSLFE SDPTQVYRQH ANRLRNVGL
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