| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_63605 |
|---|
| Symbol | fdnG |
|---|
| ID | 4384191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5669268 |
|---|
| End bp | 5672348 |
|---|
| Gene Length | 3081 bp |
|---|
| Protein Length | 1026 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639327739 |
|---|
| Product | formate dehydrogenase-O, major subunit |
|---|
| Protein accession | YP_793277 |
|---|
| Protein GI | 116054418 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGA ACCGTCGGCA ATTCTTCAAG GTCTGCGGTA TAGGCCTTGG AGGATCGAGC
CTTGCGGCGC TCGGGATGGC CCCCACGGAG GCCTTCGCCG ACCAGGTCCG CCACTTCAAG
CTGGCGCACA CGGTCGAGAC CCGCAACACC TGTACCTACT GTTCGGTCGG TTGCGGCCTG
ATCATGTACA GCCAGGGCGA CGGCGCCAAG AACGTCGCGC AGAACATCAT CCATATCGAG
GGCGACGCCG ACCATCCGGT CAACCGCGGC ACCCTCTGCC CGAAAGGCGC CGGCCTGCTG
GACTACATCC ACAGCCCGAA CCGCCTGAAG TATCCGGAAG TGCGCGAGGC CGGCTCCAGC
GAGTGGAAGC GCATCGAGTG GGACGAAGCC CTCGAGCGCA TCGCCAAGCT GATGAAGGAA
GACCGCGATG CCAACTTCGT CGAGAAGAAC GAGCAGGGCC AGACCGTCAA CCGCTGGTTG
ACCACCGGCT TCCTCGCCGC GTCCGCCTCG TCCAACGAGG CCGGCTACAT CACCCACAAG
GTGATGCGCT CCCTCGGCAT CCTGGGATTC GACAACCAGG CGCGTGTCTG ACACGGCCCG
ACGGTGGCAA GTCTTGCCCC GACGTTTGGC CGTGGAGCCA TGACCAACCA CTGGACCGAC
ATCAAGAATG CCGATCTGGT GCTGATCATG GGCGGCAACG CCGCCGAAGC CCACCCGTGC
GGATTCAAAT GGGTCACCGA AGCCAAGGCG CACAACAAGG CGCGGCTGCT GGTGGTCGAT
CCGCGTTTCA CCCGTTCCGC CTCGGTCGCC GACTACTACG CGCCGATCCG GACCGGCACC
GACATCGCCT TCCTCGGCGG CCTGATCAAC TACCTGCTGG AAAACGACAA GATCCAGCAC
GAATACGTGC GCAACTACAC CGATGTCTCG TTCATCGTGA AGGAAGGCTT CAGCTTCGAG
GACGGCCTGT TCAACGGCTA CGACGCCGAG AAGCGGACCT ACCCGGACAA GTCCTCCTGG
GGCTACGAGA TCGGTGAGGA CGGCTATGCC AAGGTCGACC CGACCCTGAC TCACCCGCGC
TGCGTGTTCA ACCTGCTCAA GCAGCACTAC AGCCGCTACA CCCCGGACGT GGTGAGCAAC
ATCTGCGGTA CGCCGAAGGA CATGATGCTC AAGGTCTGGG CGGAAATCGC CGAGACCTCC
AAGCCGGGCA AGGTCATGAC CATCATGTAC GCCCTGGGCT GGACCCAGCA CTCGGTAGGC
GCGCAGATGA TCCGCACCGG CGCGATGGTC CAGCTGCTGC TGGGCAACAT CGGCATGCCC
GGCGGCGGCA TGAACGCCCT GCGCGGCCAC TCCAACATCC AGGGCCTGAC CGACCTCGGC
CTGCTGTCCA ACTCGCTGCC GGGCTACCTG ACCCTGGCGA TGGACGCCGA GCAGGACTAC
GACGCCTACA TCGCCAAGCG CACGGCCAAG CCGCTGCGCC CGGGACAACT GTCCTACTGG
CAGAACTACG GCAAGTTCCA TGTCAGCCTG ATGAAGGCCT GGTTCGGCAA GTCGGCGACC
AAGGAAAACA ACTGGTGCTA CGACTGGCTG CCCAAGCTCG ACATGCCGGG CGCCGGCTAC
GACGTGCTGC GCTACTTCGA CATGATGTAC CAGGGCAAGG TCAACGGATA CTTCTGCCAG
GGCTTCAACC CCATCGCCTC GTTCCCTAAC AAGGCCAAGG TCGGCGCTGC GCTGGCGCGC
CTGAAGTGGA TGGTGGTGAT GGACCCGCTG GTGACCGAGA CCTCGGAGTT CTGGCGCAAC
GTCGGCGAGT ACAACGACGT CGACACCGCC AGCATCAAGA CCACGGTGTT CCGCCTGCCC
ACCTCCTGCT TCGCCGAGGA AGACGGCTCG ATCGTCAACA GCGGCCGCTG GTTGCAGTGG
CACTGGAAGG GCGCCGAGCC GCCGGGCCAG GCGCGTCCGG ACATCGCCAT CATGGCCGGG
CTGTTCCACC GCCTGCGCGA GATGTACCGC AAGGACGGCG GGGCCTTCCC CGACCCGATC
CTCGGCCTCG ACTGGTCCTA CCTCAAGCCC GACGAACCGG GCCCGGACGA ACTGGCCCGG
GAGTTCAACG GCAAGGCCCT GAGCGACCTG GTCGACCCGG CCAACGGCAT GATCCTGGCC
AAGGCCGGCG AGCAGTTGCC GGGCTTCGCC CTGCTGCGCG ACGACGGCAG CACGGCGAGC
GGCTGCTGGA TCTTCGCCGG CTCCTGGACC CAGCAGGGCA ACCAGATGGG CCGCCGCGAC
AACAGCGACC CCTACGGCAT GGGCCAGACC CTCGGCTGGG CCTGGGCCTG GCCGGCGAAC
CGGCGGATTC TCTACAACCG CGCCTCGGCC GACGTCAGCG GCAAGCCGTG GGACCCGGAG
AAGAAGCGCC TGGTGTGGTG GAACGGCAAG TCCTGGGGCG GCACCGACGT GCCCGACTAC
AAGGCCGACG TACCGCCGGA AGCCGGGATG AACCCGTTCA TCATGAACCC CGAAGGGGTG
GCCCGCCTGT TCGCCGTCGA CAAGATGGCC GAAGGCCCGT TCCCCGAGCA CTACGAGCCG
TTCGAGACGC CGATCGGGGT GAACCCCTTG CACCGCGACA ACCGCAAGGC GATCAGCAAC
CCGGCGGCAC GGGTGTTCAA GAACGACATG GAACTGTTCG GCACGGCCGA CGAGTTCCCC
TACGCAGCGA CCACCTACCG GCTCACCGAG CACTTCCACT ACTGGACCAA GCACTGCCGG
CTGAATGCGA TCACCCAGCC CGAGCAGTTC GTCGAGATCG GCGAGGCGCT GGCCAAGGAG
CTGGGCATCA ATGCCGGCGA CAAGGTCAAG GTCTCCTCCA ACCGCGGCTA CATCAAGGCG
GTGGCGGTGG TGACCAAGCG CATCCGCCCG CTGCAGGTGG ACGGCAAGAC CGTGCACCAC
GTCGGCATCC CGATCCACTG GGGCTTCGCC GGCATGGCGC GCAACGGCTT CCTGGCCAAC
ACCCTGACCC CCTTCGTGGG CGACGGGAAT ACCCAGACGC CGGAGTTCAA GTCGTTCCTG
GTCAACGTGG AAAAGGCGTG A
|
|---|
| Protein sequence | MDMNRRQFFK VCGIGLGGSS LAALGMAPTE AFADQVRHFK LAHTVETRNT CTYCSVGCGL
IMYSQGDGAK NVAQNIIHIE GDADHPVNRG TLCPKGAGLL DYIHSPNRLK YPEVREAGSS
EWKRIEWDEA LERIAKLMKE DRDANFVEKN EQGQTVNRWL TTGFLAASAS SNEAGYITHK
VMRSLGILGF DNQARVUHGP TVASLAPTFG RGAMTNHWTD IKNADLVLIM GGNAAEAHPC
GFKWVTEAKA HNKARLLVVD PRFTRSASVA DYYAPIRTGT DIAFLGGLIN YLLENDKIQH
EYVRNYTDVS FIVKEGFSFE DGLFNGYDAE KRTYPDKSSW GYEIGEDGYA KVDPTLTHPR
CVFNLLKQHY SRYTPDVVSN ICGTPKDMML KVWAEIAETS KPGKVMTIMY ALGWTQHSVG
AQMIRTGAMV QLLLGNIGMP GGGMNALRGH SNIQGLTDLG LLSNSLPGYL TLAMDAEQDY
DAYIAKRTAK PLRPGQLSYW QNYGKFHVSL MKAWFGKSAT KENNWCYDWL PKLDMPGAGY
DVLRYFDMMY QGKVNGYFCQ GFNPIASFPN KAKVGAALAR LKWMVVMDPL VTETSEFWRN
VGEYNDVDTA SIKTTVFRLP TSCFAEEDGS IVNSGRWLQW HWKGAEPPGQ ARPDIAIMAG
LFHRLREMYR KDGGAFPDPI LGLDWSYLKP DEPGPDELAR EFNGKALSDL VDPANGMILA
KAGEQLPGFA LLRDDGSTAS GCWIFAGSWT QQGNQMGRRD NSDPYGMGQT LGWAWAWPAN
RRILYNRASA DVSGKPWDPE KKRLVWWNGK SWGGTDVPDY KADVPPEAGM NPFIMNPEGV
ARLFAVDKMA EGPFPEHYEP FETPIGVNPL HRDNRKAISN PAARVFKNDM ELFGTADEFP
YAATTYRLTE HFHYWTKHCR LNAITQPEQF VEIGEALAKE LGINAGDKVK VSSNRGYIKA
VAVVTKRIRP LQVDGKTVHH VGIPIHWGFA GMARNGFLAN TLTPFVGDGN TQTPEFKSFL
VNVEKA
|
|---|
| |