Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63570 |
Symbol | fdnI |
ID | 4383279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5667632 |
End bp | 5668258 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639327737 |
Product | nitrate-inducible formate dehydrogenase, gamma subunit |
Protein accession | YP_793275 |
Protein GI | 116052958 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.13061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG AAATCCAGCG CTACAACGCC AACGAGCGCA GCAACCACTG GGCCGTGGCG ATCCTGTTCT TCATGGCCGG GCTGTCCGGG CTGGCGCTGT TCCACCCGGC GCTGTTCTGG CTGACCAACC TGTTCGGCGG CGGTCCCTGG ACGCGTATCC TGCACCCCTT CCTGGGGCTG GCGATGTTCG TCTTCTTCCT CGGCCTGGTG GTGCGCTTCG CTCACCACAA CCGGGTGCAG AAGAGCGATA TCCAGTGGCT CAAGCAGTGG CGCGACGTGG TCAGCAACCG CGAGGAGAAC CTCCCGGAAG TCGGCCGCTA CAACGCCGGG CAGAAGCTGC TGTTCTGGGT GCTGCTGCTG AGCATGCTGA CCCTGCTGGT CACCGGCATC GTGATCTGGC GCCAGTACTT CAGCGCCTGG TTCGGCATCG AGGCGATCCG CCTGTCGGCG CTCCTGCACG CCTTCGCCGC CTTCGTCCTG ATCGCCAGCA TCATCGTGCA TATCTACGCC GGCATCTGGG TCAAGGGCTC GATGGGCGCG ATGCTCTACG GCAAGGTCAG CCGCGCCTGG GCGCGCAAGC ACCATAACGG CTGGCTGAAG GAAGTCGGCA AGGGCGAGGA GCACTGA
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Protein sequence | MKNEIQRYNA NERSNHWAVA ILFFMAGLSG LALFHPALFW LTNLFGGGPW TRILHPFLGL AMFVFFLGLV VRFAHHNRVQ KSDIQWLKQW RDVVSNREEN LPEVGRYNAG QKLLFWVLLL SMLTLLVTGI VIWRQYFSAW FGIEAIRLSA LLHAFAAFVL IASIIVHIYA GIWVKGSMGA MLYGKVSRAW ARKHHNGWLK EVGKGEEH
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