Gene PA14_63280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_63280 
Symbol 
ID4383236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5647324 
End bp5648325 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID639327712 
Productputative transcriptional regulator 
Protein accessionYP_793251 
Protein GI116052934 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0263362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC TGACCGACGA TGTAGCGCTG ATGCGCCCGG TGATCGACGC CCTGCGCGCC 
AGCGGCTGCG ATCCGGACCG GGTCCTGGTC CGTGTCGGGC TGCCGCCGGG TGGCCTGCCG
GCCGGCCGTT TCCCCCATTC CGCACAGAAC CTGTTCTGGA AGGCCGCCGC CGACGAGTGC
GGCGAAGAGC ATGTCGGCCT GCACCTGGCC GAGCACCTGC CGGCGTTCCA CGGCCTGCTC
CTGGAATACC TGTTCCTTTC CAGCGATACC TTCGGCGCCG GCCTGCGCCA TTCCCTGCGC
TACGTACGCC TGCTGTCCGA CACCCTGCAG GCGCAACTGG AGGTGGAGGG CGAGCGCGCG
GTGCTGTCGC TGGGCGAATC GCCGGCGATC AACCGTCACT TCCCGGAAAT GCTCGCCGGC
GCGGTGATCC GCCTGTTCGG CGCGCTCACC GAGGGCGAGT TCAAGCCGCT GGAAGTGCAA
CTGATGAACG AAACCGGCGC GCCGATGGAG CGCTACCGTG CGGTCTACGG CTGCCCGACG
ATCCTCGGCA TGCCGCGCTA CGCGCTGGTA TTCGATGCCG CGGTGCTGGA CAAACCCTCG
CGCCACGCCG CCCCGGAACT GCTGCGCATG CATGAGTCGC TGGCGCGCCG GCAACTGGCC
GAAGTGGAGC GCCTGGACCT GGTGCGCCAG GTCCGCGAAC TGATCGGCGA GTTGCTGGTG
GACGGAGGCG CCACCCTGGA GCAGGTCGCC GCGCGCCTCG GCATGCCGGC CCGACGTCTG
CGCGAACGCC TGGCGATGGC CGGGGTGCGC TTCAACGACC TGGTCACCGA CTACCGCTGC
CGACTGGCCA AGGAACTGCT GCTGAAGACC GACGAGCGCA TCGAAGTGAT CGTCGAACGC
ACCGGGTTTT CCGAGCCGAG CACCTTCTAT CGCGCGTTCA AGCGCTGGGT CGGTGAGACG
CCGGTGGAGT TCCGCCGGCG CGGGCAGCAG GGGCGCGGGT AG
 
Protein sequence
MRDLTDDVAL MRPVIDALRA SGCDPDRVLV RVGLPPGGLP AGRFPHSAQN LFWKAAADEC 
GEEHVGLHLA EHLPAFHGLL LEYLFLSSDT FGAGLRHSLR YVRLLSDTLQ AQLEVEGERA
VLSLGESPAI NRHFPEMLAG AVIRLFGALT EGEFKPLEVQ LMNETGAPME RYRAVYGCPT
ILGMPRYALV FDAAVLDKPS RHAAPELLRM HESLARRQLA EVERLDLVRQ VRELIGELLV
DGGATLEQVA ARLGMPARRL RERLAMAGVR FNDLVTDYRC RLAKELLLKT DERIEVIVER
TGFSEPSTFY RAFKRWVGET PVEFRRRGQQ GRG