Gene PA14_63090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_63090 
SymbollldD 
ID4383220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5629153 
End bp5630298 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content70% 
IMG OID639327696 
ProductL-lactate dehydrogenase 
Protein accessionYP_793235 
Protein GI116052918 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0242094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTT CCGCTTCCAC CGACTACCGC GCCGCCGCCC AACGCAAGCT GCCGCCGTTC 
CTCTTCCACT ACATCGACGG CGGCGCCTAC GCCGAGTACA CCCTGCGCCG CAACGTCGAG
GACCTGTCGG CCATCGCCCT GCGTCAGCGG GTGCTGAAGA ACATGTCCGA GCTGAGCCTG
GAAACCCGCC TGTTCGACGA GACCCTGGCG ATGCCGGTGG CGCTCGCCCC GGTCGGTCTC
ACCGGCATGT ACGCCCGCCG CGGTGAAGTC CAGGCGGCGC GCGCGGCGGC GGCGAAGGGC
GTGCCCTTCA CCCTGTCGAC GGTATCGGTG TGCCCGATCG AGGAGGTCGC CCCGGCCATC
GACCGGCCGA TGTGGTTCCA GCTCTACGTG CTGAAGGACC GCGGCTTCAT GCGCAACGCC
CTGGAGCGGG CCAAGGCCGC CGGCGTCACC ACCCTGGTGT TCACCGTCGA CATGCCGGTC
CCCGGCGCCC GCTACCGCGA CGCCCATTCC GGCATGAGCG GCCCCTACGC CGCGCCGCGC
CGCATCCTGC AAGCCATGAC CCACCCGGCC TGGGCCTGGG ACGTCGGCCT GCTGGGCAAG
CCCCACGATC TCGGCAACAT CTCCGCCTAC CGCGGCAACC CGACCGGACT GGAGGACTAC
ATCGGCTGGC TGGGCGCCAA CTTCGACCCG TCGATTGCCT GGAAGGACCT GGAGTGGATC
CGCGAGTTCT GGGACGGCCC GATGGTGATC AAGGGCATCC TCGACCCCGA GGATGCCAGG
GATGCGGTGA AGTTCGGCGC CGACGGCATC GTCGTCTCCA ACCACGGCGG CCGCCAGCTC
GATGGCGTGC TGTCCAGCGC CCGCGCGCTG CCGGCGATCG CCGACGCGGT GAAGGGCGAA
CTGGCGATCC TTGCCGACTC CGGCATCCGC ACCGGTCTCG ACGTGGTGCG GATGATCGCC
CTCGGCGCCG ACAGCGTGCT GCTCGGCCGC GCCTTCGTCT ACGCCCTGGC CGCCGCCGGC
GAGGCCGGGG TGCGCAACCT GCTCGAACTG ATCGAAAAGG AAATGCGCGT GGCCATGGTC
CTCACCGGGG CCAAGTCGAT CGGCGAGATC AGCGCCGACT CGCTGGTCCG CGAACTGGGC
GCCTGA
 
Protein sequence
MIISASTDYR AAAQRKLPPF LFHYIDGGAY AEYTLRRNVE DLSAIALRQR VLKNMSELSL 
ETRLFDETLA MPVALAPVGL TGMYARRGEV QAARAAAAKG VPFTLSTVSV CPIEEVAPAI
DRPMWFQLYV LKDRGFMRNA LERAKAAGVT TLVFTVDMPV PGARYRDAHS GMSGPYAAPR
RILQAMTHPA WAWDVGLLGK PHDLGNISAY RGNPTGLEDY IGWLGANFDP SIAWKDLEWI
REFWDGPMVI KGILDPEDAR DAVKFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGE
LAILADSGIR TGLDVVRMIA LGADSVLLGR AFVYALAAAG EAGVRNLLEL IEKEMRVAMV
LTGAKSIGEI SADSLVRELG A