Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_63070 |
Symbol | |
ID | 4383218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5626213 |
End bp | 5626986 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639327694 |
Product | GntR family transcriptional regulator |
Protein accession | YP_793233 |
Protein GI | 116052916 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.142439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG GTCAGGTCAG GCAGCGCCGT CTGTCGGATG ACATCGTTGC GCAACTGGAG GCGATGATCC TGGAGGGCAC GCTGAAGTCC GGCGAGCGGC TGCCCGCCGA GCGCGTGCTT GCCGAGCAGT TCGGGGTTTC CCGGCCGTCG CTGCGCGAGG CGATCCAGAA ACTGGTGGCG AAGGGGCTGC TGGTCAGCCG CCAGGGTGGC GGCAACTATG TGACCGAATC GCTGGGCGCG ACTTTCAGCG ATCCGCTGCT GCACCTGCTG GAGGGTAACC CGGAGGCCCA GCGCGACCTG CTGGAGTTTC GCCACACGCT GGAAGGGTCC TGTGCCTACT ACGCGGCGCT GCGTGCGACC TCCCTCGATC ACCAGCGCCT GACCGAGGCC TTCGAGGCGC TCCAGGCCTG CTATGCGCGC AACGACCAGG TCAGCGCGGA AGAGGGCGCC GCCGACGCGC GCTTCCACCT GGCGATCGCC GAGGCCAGCC ACAACACCGT GCTGCTGCAC ACCATCAAGG GCCTGTTCGA CTTGCTGCGG CGCAACGTGG TGACCAATAT CGGCGGGATG TACGCGCAGC GCACGGAAAC CCGCGCGCAA CTGATGGAGC AGCACCAGCG CCTATACGAC GCGATCATCA GCGGTCAGGC GGAGCTGGCC CGGGAGGTGT CCAACCAGCA CATCCACTAT GTGCAGGAGG TCCTGGCGGA GGTCCAGGAA GAGGCGCGCA GGATGAAGCG CTCGCAGCGC CGGCGCAGCG TGCAGGAGGA CTAG
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Protein sequence | MEFGQVRQRR LSDDIVAQLE AMILEGTLKS GERLPAERVL AEQFGVSRPS LREAIQKLVA KGLLVSRQGG GNYVTESLGA TFSDPLLHLL EGNPEAQRDL LEFRHTLEGS CAYYAALRAT SLDHQRLTEA FEALQACYAR NDQVSAEEGA ADARFHLAIA EASHNTVLLH TIKGLFDLLR RNVVTNIGGM YAQRTETRAQ LMEQHQRLYD AIISGQAELA REVSNQHIHY VQEVLAEVQE EARRMKRSQR RRSVQED
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