| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_62710 |
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| Symbol | pnp |
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| ID | 4383189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5595303 |
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| End bp | 5597408 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639327663 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_793204 |
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| Protein GI | 116052887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.14789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCGG TAACCAAGCA ATTCCAGTTC GGTCAGTCGA CCGTCACTCT CGAGACCGGC
CGTATCGCTC GCCAGGCCAC CGGCGCCGTA CTGGTCACCA TGGACGACGT CAGCGTGCTG
GTCACCGTGG TCGGCGCCAA GTCGCCGGCC GAAGGCCGCG ACTTCTTCCC GCTGTCCGTG
CACTACCAGG AAAAGACCTA CGCCGCAGGC CGTATCCCCG GCGGTTTCTT CAAGCGTGAA
GGACGTCCTT CCGAGAAGGA AACCCTGACC TCGCGCCTGA TCGACCGTCC GATCCGTCCG
CTGTTCCCCG AAGGTTTCAT GAATGAAGTG CAGGTCGTCT GCACCGTCGT TTCCACCAAC
AAGAAGTCCG ATCCGGACAT CGCCGCGATG ATCGGTACCT CCGCCGCCCT GGCGATCTCC
GGCATTCCGT TCGCCGGCCC GATCGGCGCC GCCCGCGTCG GTTTCCATCC GGAAATCGGC
TACATCCTCA ACCCCACCTA CGAGCAACTG CAGAGTTCCA GCCTCGACAT GGTCGTGGCC
GGTACCGAAG ACGCCGTGCT GATGGTGGAG TCCGAGGCCG ACGAACTGAC CGAAGACCAG
ATGCTCGGTG CCGTGCTGTT CGCCCACGAC GAGTTCCAGG CGGTGATCCG TGCCGTCAAG
GAGCTGGCCG CCGAAGCTGG CAAGCCGGCC TGGGACTGGA AAGCCCCGGC GGAAAACACC
GTGCTGGTCA ACGCCATCAA GGCAGAGCTG GGCGAAGCGA TCTCCCAGGC CTATACCATC
ACCATCAAGC AGGACCGCTA CAACCGTCTG GGCGAGCTGC GCGACCAGGC CGTGGCCCTG
TTCGCCGGCG AGGAAGAGGG CAAGTTCCCG GCTTCCGAGG TCAAGGACGT ATTCGGCCTG
CTGGAATACC GCACCGTTCG CGAGAACATC GTCAACGGCA AGCCGCGTAT CGACGGTCGT
GACACCCGTA CCGTGCGTCC GCTGCGCATC GAAGTCGGCG TGCTCGGCAA GACCCACGGT
TCCGCGCTGT TCACCCGTGG CGAAACCCAG GCCCTGGTCG TCGCGACCCT CGGCACCGCG
CGCGATGCCC AGTTGCTGGA TACCCTGGAA GGCGAGCGCA AGGACGCCTT CATGCTGCAC
TACAACTTCC CGCCCTTCTC GGTAGGCGAG TGCGGCCGCA TGGGCAGCCC GGGTCGTCGT
GAAATCGGCC ATGGCCGTCT GGCCCGTCGT GGCGTCGCTG CCATGCTGCC GACCCAGGAC
GAGTTCCCCT ACACCATTCG CGTGGTTTCC GAGATCACCG AGTCCAACGG TTCCAGCTCG
ATGGCCTCCG TGTGCGGCGC CTCCCTGGCG CTGATGGATG CCGGTGTGCC GGTCAAGGCG
CCGGTCGCCG GTATCGCCAT GGGCCTGGTC AAGGAAGGCG AGAAGTTCGC CGTCCTGACC
GACATCCTCG GTGATGAAGA CCACCTGGGC GACATGGACT TCAAGGTTGC CGGTACCGAC
AAGGGCGTCA CCGCCCTGCA GATGGACATC AAGATCAACG GTATCACCGA AGAGATCATG
GAGATCGCCC TGGGCCAGGC CCTGGAAGCT CGCCTGAACA TCCTCGGCCA GATGAACCAG
GTCATCGCCA AGCCGCGCGC CGAGCTGTCC GAGAACGCCC CGACCATGCT GCAGATGAAG
ATCGACTCGG ACAAGATCCG CGACGTCATC GGCAAGGGCG GCGCGACCAT CCGTGGTATC
TGCGAAGAGA CCAAAGCCTC GATCGACATC GAGGACGATG GCAGCGTGAA GATCTACGGC
GAAACCAAGG AAGCCGCCGA GGCCGCCAAG CTGCGCGTCC TGGCGATCAC CGCGGAAGCC
GAGATCGGCA AGATCTATGT CGGCAAGGTG GAGCGCATCG TCGACTTCGG GGCCTTCGTC
AACATCCTGC CGGGCAAGGA CGGCCTGGTG CACATCTCGC AGATCAGCGA CAAGCGCATC
GACAAGGTCA CCGACGTGCT GCAGGAAGGC CAGGAAGTGA AGGTCCTGGT GCTCGACGTG
GACAACCGTG GCCGCATCAA GCTGTCGATC AAGGACGTGG CTGCCGCCGA AGCTTCCGGC
GTGTAA
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| Protein sequence | MNPVTKQFQF GQSTVTLETG RIARQATGAV LVTMDDVSVL VTVVGAKSPA EGRDFFPLSV
HYQEKTYAAG RIPGGFFKRE GRPSEKETLT SRLIDRPIRP LFPEGFMNEV QVVCTVVSTN
KKSDPDIAAM IGTSAALAIS GIPFAGPIGA ARVGFHPEIG YILNPTYEQL QSSSLDMVVA
GTEDAVLMVE SEADELTEDQ MLGAVLFAHD EFQAVIRAVK ELAAEAGKPA WDWKAPAENT
VLVNAIKAEL GEAISQAYTI TIKQDRYNRL GELRDQAVAL FAGEEEGKFP ASEVKDVFGL
LEYRTVRENI VNGKPRIDGR DTRTVRPLRI EVGVLGKTHG SALFTRGETQ ALVVATLGTA
RDAQLLDTLE GERKDAFMLH YNFPPFSVGE CGRMGSPGRR EIGHGRLARR GVAAMLPTQD
EFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPVKA PVAGIAMGLV KEGEKFAVLT
DILGDEDHLG DMDFKVAGTD KGVTALQMDI KINGITEEIM EIALGQALEA RLNILGQMNQ
VIAKPRAELS ENAPTMLQMK IDSDKIRDVI GKGGATIRGI CEETKASIDI EDDGSVKIYG
ETKEAAEAAK LRVLAITAEA EIGKIYVGKV ERIVDFGAFV NILPGKDGLV HISQISDKRI
DKVTDVLQEG QEVKVLVLDV DNRGRIKLSI KDVAAAEASG V
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