Gene PA14_62530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_62530 
SymbolcbrA 
ID4383174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5575942 
End bp5578893 
Gene Length2952 bp 
Protein Length983 aa 
Translation table11 
GC content66% 
IMG OID639327648 
Producttwo-component sensor CbrA 
Protein accessionYP_793189 
Protein GI116052872 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGA GCTTTAGCCT GACCCAGCTG ATCCTGATCA GCGTCGCCTA CCTCTCCACC 
CTCTTCGGCA TCGCCTGGAT CACCGAGCGC GGCTACGTGC CGCGCCGGCT GGTACGCCAC
CCGCTGGTCT ACACCCTGTC GTTGGGCGTC TACGCCAGTG CCTGGGCGTT CTACGGCACG
GTAGGCCTGG CCTACCAGTA CGGCTACGGG TTCCTCGCCA TCTACCTGGG GATTTCCGGG
GCCTTCCTGC TCGCCCCGGT GCTGCTCTAT CCGATCCTGC GGGTGACACG CGCCTACCAG
CTGTCCTCGC TGGCCGACCT CTTCGCCTTC CGTTTCCGCA GTACCTGGGC CGGCGCCCTG
ACCACGCTGT TCATGCTGAT CGGCGTGCTG CCGATGCTGG CCCTGCAGAT CCAGGCGGTC
ACCGACTCGA TCAGCATCCT CACCCGCGAC CCGGCCCAGG AGCGGGTCGC GTTCGTCTTC
TGCACCCTGA TCACCCTGTT CGCGATCCTC TTCGGCGCTC GCCACATCGC CACCCGCGAA
CGCCACGAGG GACTGGTGTT CGCCATCGCC TTCGAGTCGC TGGTCAAGCT GGTGATGCTC
GGCAGTATCG GCCTCTACGC CCTGTACGGC GTCTTCGGCG GGCCGGAAGG CCTGGAAGTC
TGGCTGCTGC AGAACCAGAC CGCGCTGACC ACCCTGCACA CGCCGCTGGC CGAGGGTCCA
TGGCGAACGC TGCTGCTGGT GTTCTTCGCC GCGGCCATCG TGATGCCGCA CATGTTCCAC
ATGATCTTCA CCGAGAACCT CAACCCGCGC GCGCTGATTT CCGCCAGCTG GGGCCTGCCG
CTGTTCCTGC TGCTGATGAG CCTTGCGGTA CCGCCGATCC TCTGGGCCGG GCTGCGCCTC
GGCGCCTCGA CCACACCGGA GTACTACACC ATCGGCCTCG GCCTGGCGGT GGACAGCCCG
GCCCTGGCCC TGGCCGCCTT CATCGGCGGC ATCTCCGCCG CCAGCGGGCT GACTATCGTG
ATGACCCTGG CGCTCTCGGG AATGGTCCTC AACCACCTGG TGCTGCCGCT CTACCAGCCG
CCGGCGCAGG GCAACATCTA CCGCTGGCTG AAATGGACCC GGCGCCTGCT GATCGTCGCC
ATCATCATGG CCAGCTACGC CTTCTACCTG CTGCTGGGCG CCGAACAGGA CCTCTCCAAC
CTGGGCATAG TGTCCTTCGT CGCCACCCTG CAATTCCTTC CCGGCGCCCT CTCGGTGCTG
TACTGGCCGA CCGCCAACCG CCGCGGCTTC ATCTCCGGGC TGATCGCCGG CATGCTGGTC
TGGGCGATCA CCATGCTGCT GCCCCTGATG GGGAACGTAC AGGGCCTGTA CCTGCCGCTG
TTCGACGTGA TCTACGTGCT GGACGACTCC AACTGGCACC TGGCGGCGCT GTCCTCGCTG
GCGGCCAACG TGCTGGTATT CACCCTGGTC TCGCTGTTCA CCGAGGCCAG CGACGAGGAA
AAAGGCGCCG CCGAGGCCTG CGCGGTGGAC AACGTACGCC GTCCGCAACG CCGCGAACTG
TTCGCCGGCT CGCCGCAGGA GTTCGCCAGC CAGCTGGCCA AGCCGCTGGG CGCCAAGACC
GCGCAGAAGG AGGTCGAGCA GGCCCTGCGC GATCTCCACC TGCCCTTCGA CGAACGTCGC
CCCTATGCCC TGCGTCGCTT GCGCGACCGT ATCGAGGCGA ACCTTTCCGG GCTGATGGGT
CCCAGTGTCG CCCAGGACAT CGTGGAGACC TTCCTTCCCT ACAAGACCAG CGAAGAAAGC
TATGTCACCG AGGACATCCA CTTCATCGAG AGCCGCCTGG AGGACTATCA CTCCCGGCTG
ACCGGCCTCG CCGCCGAACT CGACACCCTG CGCCGCTACC ACCGGCAGAC CCTGCAAGAC
CTGCCGATGG GCGTCTGCTC CCTGGCCAAG GACCAGGAAG TGCTGATGTG GAACCGCGCC
ATCGAGGAAC TCACCGGGGT CGGCGCGCAG AAGGTCGTCG GTTCGCGCCT GTCGGCCTTG
CCCGAACCCT GGAAGGGCCT GCTGGAACGT TTCATCGACG CCCCCGACGA GCACCTGCAC
AAGCAGCGCC TGGTCTACGA CGGCCACACC CGCTGGCTGA ACCTGCACAA GGCGGCCATC
GAGGAACCCC TGGCGCCGGG TAACAGCGGC CTGGTGCTAC TGGTGGAAGA CCTCACCGAA
ACCCAACTGC TGGAAGACAA GCTGGTCCAC TCCGAACGCC TGGCTTCCAT CGGCCGCCTT
GCCGCCGGGG TAGCCCACGA GATCGGCAAT CCGATCACCG GCATCGCCTG CCTGGCGCAG
AACCTGCGCG AGGAGCGCGA AGGCGACGGC GAGCTGACCG AGATTAGCGA GCAGATCCTC
GACCAGACCA AGCGCGTATC GCGCATCGTC CAGTCGTTGA TGAGCTTCGC CCACTCCGGT
AGCCACCTGC AGGCCCTGGA ACCGGTGTGC CTGAGCGAAG TCGCCCAGGA GGCCATCGGA
CTGCTGTCGC TGAACCGGCG TAGCGTCGAA GTAGAGTTCT TCAACCTCTG CGATCCGGCG
CACTGGGTCG AGGGCGACTC GCAGCGCCTG GCCCAGGTGC TGATCAACCT GCTCTCCAAT
GCTCGCGACG CCAGCCCGCC GGGCGGCGCG ATCCGGGTCC GCAGCGAAGC CTCGGAACAT
ACCGTGGACC TGGTCGTCGA GGACGAGGGC AGCGGCATCC CGAAGGCGAT CATGGACCAG
TTGTTCGAAC CGTTCTTCAC CACCAAGGAC CCCGGTAAGG GGACCGGGCT CGGCCTCGCA
CTGGTCTATT CGATCGTGGA AGAGCATTAT GGACAGATAA CCATCGAGAG CCCGACGGAT
CACCAGCGAG AAGGCGGCAC CCGCTTCCGC GTGACCCTGC CGCGGCACCC TGGCCCGACG
GCCGAGCTGT AG
 
Protein sequence
MLTSFSLTQL ILISVAYLST LFGIAWITER GYVPRRLVRH PLVYTLSLGV YASAWAFYGT 
VGLAYQYGYG FLAIYLGISG AFLLAPVLLY PILRVTRAYQ LSSLADLFAF RFRSTWAGAL
TTLFMLIGVL PMLALQIQAV TDSISILTRD PAQERVAFVF CTLITLFAIL FGARHIATRE
RHEGLVFAIA FESLVKLVML GSIGLYALYG VFGGPEGLEV WLLQNQTALT TLHTPLAEGP
WRTLLLVFFA AAIVMPHMFH MIFTENLNPR ALISASWGLP LFLLLMSLAV PPILWAGLRL
GASTTPEYYT IGLGLAVDSP ALALAAFIGG ISAASGLTIV MTLALSGMVL NHLVLPLYQP
PAQGNIYRWL KWTRRLLIVA IIMASYAFYL LLGAEQDLSN LGIVSFVATL QFLPGALSVL
YWPTANRRGF ISGLIAGMLV WAITMLLPLM GNVQGLYLPL FDVIYVLDDS NWHLAALSSL
AANVLVFTLV SLFTEASDEE KGAAEACAVD NVRRPQRREL FAGSPQEFAS QLAKPLGAKT
AQKEVEQALR DLHLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDIVET FLPYKTSEES
YVTEDIHFIE SRLEDYHSRL TGLAAELDTL RRYHRQTLQD LPMGVCSLAK DQEVLMWNRA
IEELTGVGAQ KVVGSRLSAL PEPWKGLLER FIDAPDEHLH KQRLVYDGHT RWLNLHKAAI
EEPLAPGNSG LVLLVEDLTE TQLLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ
NLREEREGDG ELTEISEQIL DQTKRVSRIV QSLMSFAHSG SHLQALEPVC LSEVAQEAIG
LLSLNRRSVE VEFFNLCDPA HWVEGDSQRL AQVLINLLSN ARDASPPGGA IRVRSEASEH
TVDLVVEDEG SGIPKAIMDQ LFEPFFTTKD PGKGTGLGLA LVYSIVEEHY GQITIESPTD
HQREGGTRFR VTLPRHPGPT AEL