Gene PA14_62290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_62290 
Symbol 
ID4385031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5557967 
End bp5558950 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content70% 
IMG OID639327629 
Productputative permease of ABC transporter 
Protein accessionYP_793170 
Protein GI116052853 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00186765 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.421287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGTCC TCTGGTTGTC CCTCGCCCTC GGTCCCGTCA GCCTGCCGCT GGGCGATACC 
CTGCGCGCCG CGCTGCGCCT GGCCGGGCTG CCGCTCGATG GAACGGGCCT GGCCCAGGCG
GAAATGATCC TCGGCCAGAT CCGCCTGCCG CGGACCCTGC TCGGCCTGGC CGTGGGCGCG
GTGCTGGCGC TGTCCGGGGT GGCGATGCAG GGCCTGTTCC GCAACCCGCT GGCCGATCCA
GGGCTGGTCG GGGTGTCCAG CGGCGCGGCC CTCGGCGCGG CGCTGGCCAT CGTATTCGGC
GCCTCGCTGG GCGGCTTGCC GGCGTTCCTC GCGCCTTACC TGCTGTCGCT GTGCGCCTTC
GGCGGCGGCC TGGGGGTGAC CTGGCTGGTC TATCGGCTTG GCCGCCGCGA TGGCCAGACC
AGCGTGGCCA CCATGTTGTT GGCAGGGATC GCCTTGACCG CACTGTCCGG CGCGGTGATC
GGACTGTTTA CCTATCTCGC CGATGACGCC ACCTTGCGTA CCCTGACCTT CTGGAACCTG
GGCAGCCTGA ACGGCGCCAG CTACCCACGA CTCTGGCCGC TGCTGCTGGT GGCGCTGCTG
GTGGCCTGCT GGCTACCGCG CCGGGCAGAT GCGCTGAACG CACTGCTGCT CGGCGAGTCC
GAGGCCCGTC ACCTGGGCTT CGACGTCGAG CGATTGAAGG CCGAACTGGT GCTTTGCACT
GCCCTCGGCG TCGGCGCCGC AGTGGCGGCG GCGGGGATGA TCGGCTTCAT CGGCCTGGTG
GTGCCGCACC TGATCCGTCT GGTTGCCGGT CCGGATCATC GGACGTTGCT GCCGGCCTCG
ATGATGGCCG GCGCCATTCT CCTGCTGCTT GCCGACCTGC TGGCGCGCCT GGCGCTGGCT
CCGGCGGAGT TGCCGATCGG CATCGTCACG GCACTGATCG GCGCGCCGTT CTTCCTTTAT
CTGCTATTGC GGGGGCGGGC CTGA
 
Protein sequence
MLVLWLSLAL GPVSLPLGDT LRAALRLAGL PLDGTGLAQA EMILGQIRLP RTLLGLAVGA 
VLALSGVAMQ GLFRNPLADP GLVGVSSGAA LGAALAIVFG ASLGGLPAFL APYLLSLCAF
GGGLGVTWLV YRLGRRDGQT SVATMLLAGI ALTALSGAVI GLFTYLADDA TLRTLTFWNL
GSLNGASYPR LWPLLLVALL VACWLPRRAD ALNALLLGES EARHLGFDVE RLKAELVLCT
ALGVGAAVAA AGMIGFIGLV VPHLIRLVAG PDHRTLLPAS MMAGAILLLL ADLLARLALA
PAELPIGIVT ALIGAPFFLY LLLRGRA