Gene PA14_62100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_62100 
Symbol 
ID4384630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5541735 
End bp5542343 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content62% 
IMG OID639327613 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_793154 
Protein GI116052837 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0813375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00458105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTACT GGTATCTGCG CCTTGCGGTA TTCCTGGGGG CGCTGGCAGT GCCGGCCTGG 
TGGTTGTACC AAGCCTGGAT CTTTGCCCTC GGACCTGACC CGGGCAAGAC CCTGGTCGAT
CGACTGGGGC TGGGCGCCTT GGTATTGCTG CTACTCACCC TGGCGATGAC GCCACTGCAG
AAGCTGAGCG GCTGGCCGGG CTGGATTGCC GTGCGTCGCC AGTTGGGGTT GTGGTGCTTC
ACCTATGTGC TGCTGCACCT GAGCGCTTAC TGCGTGTTCA TCCTGGGGTT GGACTGGGGG
CAGTTGGGCA TCGAATTGAG CAAGCGTCCC TACATCATCG TGGGAATGCT TGGATTCGTC
TGCCTGTTCC TGTTGGCGAT CACTTCCAAC CGCTTCGCCA TGCGCAAGCT CGGTAGCCGC
TGGAAGAAGC TGCATCGCCT GGTCTACCTG ATCCTTGGGC TCGGCTTGCT GCACATGCTC
TGGGTGGTGC GGGCAGACCT GGAGGAGTGG ACCCTGTACG CTGTGGTTGG TGCGTCGCTC
ATGCTGCTGC GGCTACCCTC GATCGCTCGC CGCCTGCCCA GGCTTCGAAC TCGTCCCGGT
GTTTCGTAA
 
Protein sequence
MRYWYLRLAV FLGALAVPAW WLYQAWIFAL GPDPGKTLVD RLGLGALVLL LLTLAMTPLQ 
KLSGWPGWIA VRRQLGLWCF TYVLLHLSAY CVFILGLDWG QLGIELSKRP YIIVGMLGFV
CLFLLAITSN RFAMRKLGSR WKKLHRLVYL ILGLGLLHML WVVRADLEEW TLYAVVGASL
MLLRLPSIAR RLPRLRTRPG VS