| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_61870 |
|---|
| Symbol | |
|---|
| ID | 4385675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 5518127 |
|---|
| End bp | 5519365 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639327593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_793139 |
|---|
| Protein GI | 116052822 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4690] Dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0219893 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGACA CCCTGATCCT TCGCCACCAG GGCCAGACCT GGTTCGCCAA GAACAGCGAC
CGCGAGCCCG CCGAACCGCA GCGTCTGCTG CGCCTGCCGG TGGTGCGCAA CGATCCGGAA
GCGCGCTTGC GCACCACCTA CCTCGACATT CCCCAGGCCG CCCAGCGGCA TGCGCTGGTG
ATCAGCCAGC CGAGCTGGAT CTGGGGCGCG GAAATGGGCG TCAATGAGCA CGGCGTGGCC
ATCGGCAACG AAGCGGTGTT CACCAAGCTG ACCCGTCAGC GCGGCACCGC GCTGCTCGGC
ATGGACCTGC TGCGCCTGGG ACTGGAGCGC GGCGCCAGCG CCCGCGAGGC GCTGGAGGTG
ATCACCGGGT TGTTGCAGCG TTACGGCCAG GGCGGCCCGG CCGGCTACCG CGACAAGCGC
ATCCGCTACG ACAACAGCTT CCTCATCGCC GACCCCGGCG AAGCCTGGGT GCTGGAAACC
GCCGGCAACC TGTGGGCGGC GAAGAAGGTC GAGCGCTGGG CCATCTCCAA CGCCCTGACC
CTTGGCCACG AATTCGACCT GTGCAGCCGC GACCTCGAGG ACCAGGCACG CCGCCAGGGC
TGCTGGGATG GTCGCGGCGA CTTCCACTTC GCGCGGGTCT TCGACACCCG CCTGCTACCC
TGGGTCGGCG GCGCGCACCG GCGCTGTCGG ATCAACCAGC GCTTCCTCGA CAGCCTGCCT
GGCGAGCCGG ACTGGCACGC GCTGTTCGCC GCGCTGCGTC ACCATGGCCC GCGCGGGGAC
CACTTCCGCC GCCACAACAA CCGCCAGGTA TGCATGCACG CCGGCAGCTT CTGGCGGCCT
TCGCAGACCA CCGCCAGTCT GGTCGCCCGC TTGCGCGACG ACGGCCCGCT GTTGGCCGCC
ACCGGTACTT CGGCGCCGTG CCTGGGACTG TTCCAGCCGC TGTCCTTCGA TCCGGCCTCC
GGCGCCGCCG TGCTCAGCCA GCCGCGCGAG GCGGTACAGG AGTCTCCCTG GTGGCGCTTC
GAGGCGGTGC ACCGCCGCGC GCTCACCGAC CGCGCCTTCC GCCGGCTCCT GCGCAGCGGC
CGCGATTGGC TGGAACGGGA ACTCTTCGCC GACCTCGAAC AGCCCGACTG GCCGCGCCTG
GCAGAGGACG CCGCAGCCTG GCACGCCTGT TGGCATGATC AGGTCGCCAT GCAGCCGCTG
GCGCAGCAGC GCTGGTGGCG TAGCCACGCC GCGCTGTGA
|
|---|
| Protein sequence | MCDTLILRHQ GQTWFAKNSD REPAEPQRLL RLPVVRNDPE ARLRTTYLDI PQAAQRHALV
ISQPSWIWGA EMGVNEHGVA IGNEAVFTKL TRQRGTALLG MDLLRLGLER GASAREALEV
ITGLLQRYGQ GGPAGYRDKR IRYDNSFLIA DPGEAWVLET AGNLWAAKKV ERWAISNALT
LGHEFDLCSR DLEDQARRQG CWDGRGDFHF ARVFDTRLLP WVGGAHRRCR INQRFLDSLP
GEPDWHALFA ALRHHGPRGD HFRRHNNRQV CMHAGSFWRP SQTTASLVAR LRDDGPLLAA
TGTSAPCLGL FQPLSFDPAS GAAVLSQPRE AVQESPWWRF EAVHRRALTD RAFRRLLRSG
RDWLERELFA DLEQPDWPRL AEDAAAWHAC WHDQVAMQPL AQQRWWRSHA AL
|
|---|
| |