Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61790 |
Symbol | pth |
ID | 4385670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5512065 |
End bp | 5512649 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327587 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_793134 |
Protein GI | 116052817 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0172217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0107656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGCCG TACAACTGAT CGTTGGCCTG GGAAACCCGG GTCCTGAATA CGACCAGACC CGGCATAACG CGGGGGCCCT TTTCGTTGAG CGCCTGGCGC ATGCCCAGGG CGTCAGCCTC GTGGCTGACC GCAAGTATTT CGGCCTGGTC GGCAAGTTCA GCCACCAGGG CAAGGACGTT CGTCTGTTGA TCCCGACTAC CTATATGAAC CGCAGCGGCC AGTCCGTGGC GGCGCTGGCG GGATTCTTCC GGATCGCCCC GGACGCCATC CTGGTGGCCC ACGACGAACT CGACATGCCC CCTGGCGTCG CCAAGCTCAA GACCGGCGGC GGACACGGCG GGCACAACGG GTTGCGCGAT ATCATCGCCC AGCTCGGCAA TCAGAATTCT TTCCATCGCC TGCGGCTTGG CATCGGCCAT CCGGGGCACA GCAGCCTGGT TTCCGGTTAC GTGCTCGGCC GCGCCCCGCG CAGCGAGCAG GAACTGCTCG ACACCAGCAT CGACTTCGCC CTCGGCGTGC TGCCGGAAAT GCTCGCCGGG GACTGGACCC GGGCGATGCA GAAGCTGCAC AGCCAGAAGG CCTGA
|
Protein sequence | MTAVQLIVGL GNPGPEYDQT RHNAGALFVE RLAHAQGVSL VADRKYFGLV GKFSHQGKDV RLLIPTTYMN RSGQSVAALA GFFRIAPDAI LVAHDELDMP PGVAKLKTGG GHGGHNGLRD IIAQLGNQNS FHRLRLGIGH PGHSSLVSGY VLGRAPRSEQ ELLDTSIDFA LGVLPEMLAG DWTRAMQKLH SQKA
|
| |