Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61740 |
Symbol | lolB |
ID | 4385666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5508717 |
End bp | 5509334 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327582 |
Product | outer membrane lipoprotein LolB |
Protein accession | YP_793130 |
Protein GI | 116052813 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00215048 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTCTAC GTCTTTTCCT CGCCGCCTCC GCGCTGGCCC TGCTCAGCGG CTGCGCCGGC CTGACCTCCC ACGAAGCCCT GGAAGGCCAG GGCGATGCGC AGACCTGGAA AACCCACAAG CAGCAACTCA GCGAGCTGGA TGCCTGGCAG ATCGACGGCA AGGTCGGCAT CCGCGCCCCG CGCGACTCCG GCAGCGGCAC CCTGTTCTGG CTGCAGCGCC AGGGCTACTA CGACATCCGC CTGTCCGGCC CGCTCGGCCG CGGCGCAGCA CGCCTGACCG GGCGTGAAGG CGCGGTGAGC CTGGAAGTCG CCGGGCAGGG CCGCTACCAG GCGGAGTCCC CGGAAGCCCT GCTGGAAGAA CAACTAGGCT GGCGCCTGCC GGTCTCGCAC CTGCTCTGGT GGGTACGCGG CCTCCCGGCG CCGGACAGCA AGAGCCGCCT GACCCTCGAC GCCGACAGTC GCCTGGCGCG CTTGGAACAG GACGGCTGGC AGATCGAATA CACCCGCTAC GCCGAACAGA ACGGCTACTG GCTACCCGAG CGCCTGAAGC TGCACGGCCA GGACCTCGAC GTCACCCTGG TGATCAAGGA CTGGCAGCCG CGCCAGCTCG GCCGCTGA
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Protein sequence | MRLRLFLAAS ALALLSGCAG LTSHEALEGQ GDAQTWKTHK QQLSELDAWQ IDGKVGIRAP RDSGSGTLFW LQRQGYYDIR LSGPLGRGAA RLTGREGAVS LEVAGQGRYQ AESPEALLEE QLGWRLPVSH LLWWVRGLPA PDSKSRLTLD ADSRLARLEQ DGWQIEYTRY AEQNGYWLPE RLKLHGQDLD VTLVIKDWQP RQLGR
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