| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_61720 |
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| Symbol | |
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| ID | 4385665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5506940 |
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| End bp | 5508712 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639327581 |
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| Product | hypothetical protein |
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| Protein accession | YP_793129 |
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| Protein GI | 116052812 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02996] repeat-companion domain TIGR02996 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.541036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.00206868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGGCGC CACCCTCGCA GGTTCAAGGC CGGCTTTCTT CCTCTATGAA CAAATCCCTT
GCGCTGCTGA CCGTCACGCT GCTGCTCGGC GGCTGCCAGT CACTTATCCA CAAGACTCCC
GATGGCACCC CGCCGGTGGA AGACACCGCG GTCGAGACCA AGGCCAAGCC GGAAAAGTAC
GGCTCCTTCA GCGAGGACAG CCTGTATTCG CTGCTGGTGG CCGAACTGGC CGGGCAGCGC
AACCGCTTCG ACATCGCCCT GAGCAACTAT GTGGTGCAGG CGCAGAAAAC CCGCGACCCC
GGAGTTTCCG AGCGCGCCTT CCGCATCGCC GAATACCTCG GCGCCGACCA GGAAGCCCTC
GACACCTCCC TGCTCTGGGC GCGCAGCGCG CCGGACAACC TCGATGCCCA ACGCGCCGCC
GCGATCCAGT TGGCCCGCGC CGGGCGCTAC GAGGAGTCCA TGGTGTACAT GGAGAAGGTT
CTCAACGGCC AGGGCGACAC GCACTTCGAC TTCCTCGCCC TGTCTGCCGC GGAGACCGAC
CCGGATACCC GCACCGGCCT GCTGCAGAGC TTCGACCACC TGTTGAAGAA ATACCCGAAC
AACGGCCAGT TGCTGTTCGG CAAGGCCCTG CTGCTGCAAC AGGACGGCCG CCCGGACGAA
GCCCTGACCC TGCTCGAGGA CAACTCCGCA AGCCGCCACG AAGTCGCCCC GCTGCTGCTC
CGCTCCCGCC TGTTGCAGAG CATGAAGCGC AGCGACGAGG CCCTGCCGCT GCTCAAGGCC
GGGATCAAGG AACACCCGGA CGACAAGCGC GTGCGCCTCG CCTACGCGCG CCTGCTGGTG
GAGCAGAACC GCCTGGATGA CGCCAAGGCC GAGTTCGCCG GACTGGTCCA GCAATTCCCC
GACGACGACG ACCTGCGTTT CTCCCTGGCG CTGGTCTGCC TGGAAGCCCA GGCCTGGGAC
GAAGCCAGGA TCTACCTGGA AGAACTGGTC GAGCGCGACA GCCACGTCGA CGCCGCCCAC
TTCAACCTCG GCCGCCTCGC CGAGGAACAG AAGGACACCG CGCGCGCCCT CGACGAGTAC
GCCCAGGTCG GCCCGGGCAA TGACTTCCTC CCGGCGCAAC TGCGCCAGAC CGACGTCCTG
CTCAAGGCCG GTCGCGTCGA CGAAGCCGCC CAGCGCCTGG ACAAGGCGCG CAGCGAGCAA
CCCGACTACG CCATCCAGCT GTACCTGATC GAAGCCGAGG CGCTGTCCAA CAACGACCAG
CAGGAAAAGG CCTGGCAGGC CATCCAGGAG GGTCTGAAGC AGTACCCGGA GGACCTCAAC
CTGCTCTACA CCCGCTCGAT GCTGGCGGAG AAGCGTAACG ACCTGGCGCA GATGGAAAAG
GACCTGCGCT TCGTCATCGC CCGCGAGCCG GACAACGCCA TGGCCCTCAA CGCCCTCGGC
TACACCCTGG CCGACCGCAC TACCCGCTAC ACCGAGGCGC GCGAGCTGAT CCTCAAGGCG
CACAAGCTGA ACCCGGACGA CCCGGCGATC CTCGACAGCA TGGGCTGGAT CAACTATCGC
CAGGGCAAGC TGGCGGACGC CGAGCGCTAC CTGCGCCAGG CGCTGCAGCG CTACCCCGAC
CACGAGGTCG CCGCGCACCT GGGCGAAGTC CTCTGGGCCC AGGGGCGCCA AGACGACGCC
CGGGCCATCT GGCGCGAATA CCTCGACAAG CAGCCCGACA GCGACGTGCT GCGCCGCACC
ATCAAGCGCC TGACCGGCGC CGAGACTCCT TGA
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| Protein sequence | MMAPPSQVQG RLSSSMNKSL ALLTVTLLLG GCQSLIHKTP DGTPPVEDTA VETKAKPEKY
GSFSEDSLYS LLVAELAGQR NRFDIALSNY VVQAQKTRDP GVSERAFRIA EYLGADQEAL
DTSLLWARSA PDNLDAQRAA AIQLARAGRY EESMVYMEKV LNGQGDTHFD FLALSAAETD
PDTRTGLLQS FDHLLKKYPN NGQLLFGKAL LLQQDGRPDE ALTLLEDNSA SRHEVAPLLL
RSRLLQSMKR SDEALPLLKA GIKEHPDDKR VRLAYARLLV EQNRLDDAKA EFAGLVQQFP
DDDDLRFSLA LVCLEAQAWD EARIYLEELV ERDSHVDAAH FNLGRLAEEQ KDTARALDEY
AQVGPGNDFL PAQLRQTDVL LKAGRVDEAA QRLDKARSEQ PDYAIQLYLI EAEALSNNDQ
QEKAWQAIQE GLKQYPEDLN LLYTRSMLAE KRNDLAQMEK DLRFVIAREP DNAMALNALG
YTLADRTTRY TEARELILKA HKLNPDDPAI LDSMGWINYR QGKLADAERY LRQALQRYPD
HEVAAHLGEV LWAQGRQDDA RAIWREYLDK QPDSDVLRRT IKRLTGAETP
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