Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61470 |
Symbol | upp |
ID | 4381735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5484787 |
End bp | 5485425 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327560 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_793108 |
Protein GI | 116052791 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.273036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTAC ATGAGATCCG CCACCCCCTC ATCCGCCACA AACTGGGCCT GATGCGCCGT GCCGATATCA GCACCAAGAA CTTCCGCGAA CTGGCCCAGG AAGTCGGCGC CCTGCTGACC TACGAGGCGA CCAAGGACCT GCCCCTGGAA CAGTACGAAA TCCCCGGATG GGCCGGCCCG GTGACGGTGG AGAAGATCTC CGGGAAGAAG ATCACCGTGG TGCCGATCCT GCGCGCCGGC ATCGGCATGC TCGACGGCGT GCTCAGCCTG ATTCCCGGCG CCAAGGTCAG CGCGGTCGGC GTCGCCCGCA ACGAAGAGAC CCTGGAAGCA CGCACCTACC TGGAAAAACT GGCGCCGGAC ATCGCCGAGC GCCGCTCGCT GATCATCGAC CCGATGCTCG CCACCGGTGG CTCGATGGTC GCCACCATCG ACCTGCTGAA GAAGGCCGGC AGCAAGGAAA TCCGCGCCAT GGTGCTGGTC GCCGCCCCTG AGGGCATCGA GGCGGTACGC AAGGCCCACC CGGACGTGAT CATCTATACC GCCTCGATCG ACGAGAAGCT CGACGAGAAC GGCTACATCA TTCCGGGCCT GGGCGACGCC GGCGACAAGA TCTTCGGTAC CAAGCAGAAG GAAGCCTGA
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Protein sequence | MPVHEIRHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATKDLPLE QYEIPGWAGP VTVEKISGKK ITVVPILRAG IGMLDGVLSL IPGAKVSAVG VARNEETLEA RTYLEKLAPD IAERRSLIID PMLATGGSMV ATIDLLKKAG SKEIRAMVLV AAPEGIEAVR KAHPDVIIYT ASIDEKLDEN GYIIPGLGDA GDKIFGTKQK EA
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