Gene PA14_61210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_61210 
SymbolhprA 
ID4382993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5465175 
End bp5466146 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content71% 
IMG OID639327538 
Productglycerate dehydrogenase 
Protein accessionYP_793086 
Protein GI116052769 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.208165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG CCCTGCGCGC CGTTTTCCTC GACCATGCCT CCCTCGACCT CGGCGACCTG 
GACATGCGCC CCCTGCGCGC CGCCTTCGAC GAGCTGCAAC TGCATGCCGC CAGCCAACCG
CAGGAAGTCG CCGCGCGGCT GCACGGTGCG CGGGTCGCGA TCAGCAACAA GGCGCCGATC
GACGCGCAAT GCATCGCCGC CTGCCCAGAG CTGGAACTGA TCCTGGTCAG CGCTACCGGC
ACCAACAACA TCGATCTCGC TGCCGCTCGC GAGCGCGGTA TCGTCGTCGC CAACTGCCAT
GGCTACGGCA CGCCCTCGGT AGCCCAGCAC ACCCTCGCGT TGCTACTGGC CCTGGCTACG
CGCCTGCCGG ACTACCAGCA GGCGGTACGC AGCGGCCGCT GGCAGCAATC CAGCCAGTTC
TGCCTGCTGG ACTTCCCCAT CGTCGAACTG GAAGGCAAGA CCCTCGGCCT GCTCGGCCAT
GGCGAACTGG GCGGGGCGGT GGCGCGGCTG GCGGAGGCGT TCGGCATGCG CGTGCTGCTC
GGTCAGTTGC CAGGACGGCC CGCCCGGGCG GACCGCCTGC CGCTTGGCGA ACTCCTGCCA
CGGGTCGACG CCCTGACCCT GCACTGCCCG CTGACCGAGG ACACCCGCGG GATGCTCGGC
GCCGCCGAAC TGGCGCTGAT GAAGCCTGGC GCCTTCCTGG TCAATACCGC CCGTGGCGGC
CTGGTCGACG AACAGGCGCT GGCCGACGCC CTGCGCGGCG GCCACCTGGG CGGCGCCGCC
ACCGACGTGC TCAGCGTCGA GCCGCCGAGA AACGGCAATC CGCTGCTGGC CCCCGACATC
CCGCGCCTGA TCGTCACCCC CCATAACGCC TGGGGCAGTC GCGAGGCGCG GCAGCGCATC
GTCGGCCAAC TGGCGGAAAA CGCAGAGGCA TGGAAGGCCG GGCGCGCCCT GCGGGTAGTC
AACGCCGGCT GA
 
Protein sequence
MSHALRAVFL DHASLDLGDL DMRPLRAAFD ELQLHAASQP QEVAARLHGA RVAISNKAPI 
DAQCIAACPE LELILVSATG TNNIDLAAAR ERGIVVANCH GYGTPSVAQH TLALLLALAT
RLPDYQQAVR SGRWQQSSQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLL
GQLPGRPARA DRLPLGELLP RVDALTLHCP LTEDTRGMLG AAELALMKPG AFLVNTARGG
LVDEQALADA LRGGHLGGAA TDVLSVEPPR NGNPLLAPDI PRLIVTPHNA WGSREARQRI
VGQLAENAEA WKAGRALRVV NAG