Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61210 |
Symbol | hprA |
ID | 4382993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5465175 |
End bp | 5466146 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639327538 |
Product | glycerate dehydrogenase |
Protein accession | YP_793086 |
Protein GI | 116052769 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.208165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATG CCCTGCGCGC CGTTTTCCTC GACCATGCCT CCCTCGACCT CGGCGACCTG GACATGCGCC CCCTGCGCGC CGCCTTCGAC GAGCTGCAAC TGCATGCCGC CAGCCAACCG CAGGAAGTCG CCGCGCGGCT GCACGGTGCG CGGGTCGCGA TCAGCAACAA GGCGCCGATC GACGCGCAAT GCATCGCCGC CTGCCCAGAG CTGGAACTGA TCCTGGTCAG CGCTACCGGC ACCAACAACA TCGATCTCGC TGCCGCTCGC GAGCGCGGTA TCGTCGTCGC CAACTGCCAT GGCTACGGCA CGCCCTCGGT AGCCCAGCAC ACCCTCGCGT TGCTACTGGC CCTGGCTACG CGCCTGCCGG ACTACCAGCA GGCGGTACGC AGCGGCCGCT GGCAGCAATC CAGCCAGTTC TGCCTGCTGG ACTTCCCCAT CGTCGAACTG GAAGGCAAGA CCCTCGGCCT GCTCGGCCAT GGCGAACTGG GCGGGGCGGT GGCGCGGCTG GCGGAGGCGT TCGGCATGCG CGTGCTGCTC GGTCAGTTGC CAGGACGGCC CGCCCGGGCG GACCGCCTGC CGCTTGGCGA ACTCCTGCCA CGGGTCGACG CCCTGACCCT GCACTGCCCG CTGACCGAGG ACACCCGCGG GATGCTCGGC GCCGCCGAAC TGGCGCTGAT GAAGCCTGGC GCCTTCCTGG TCAATACCGC CCGTGGCGGC CTGGTCGACG AACAGGCGCT GGCCGACGCC CTGCGCGGCG GCCACCTGGG CGGCGCCGCC ACCGACGTGC TCAGCGTCGA GCCGCCGAGA AACGGCAATC CGCTGCTGGC CCCCGACATC CCGCGCCTGA TCGTCACCCC CCATAACGCC TGGGGCAGTC GCGAGGCGCG GCAGCGCATC GTCGGCCAAC TGGCGGAAAA CGCAGAGGCA TGGAAGGCCG GGCGCGCCCT GCGGGTAGTC AACGCCGGCT GA
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Protein sequence | MSHALRAVFL DHASLDLGDL DMRPLRAAFD ELQLHAASQP QEVAARLHGA RVAISNKAPI DAQCIAACPE LELILVSATG TNNIDLAAAR ERGIVVANCH GYGTPSVAQH TLALLLALAT RLPDYQQAVR SGRWQQSSQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLL GQLPGRPARA DRLPLGELLP RVDALTLHCP LTEDTRGMLG AAELALMKPG AFLVNTARGG LVDEQALADA LRGGHLGGAA TDVLSVEPPR NGNPLLAPDI PRLIVTPHNA WGSREARQRI VGQLAENAEA WKAGRALRVV NAG
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