Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_61200 |
Symbol | |
ID | 4382992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5458870 |
End bp | 5464854 |
Gene Length | 5985 bp |
Protein Length | 1994 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639327537 |
Product | hypothetical protein |
Protein accession | YP_793085 |
Protein GI | 116052768 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCGTC CGGATAGCCA GCGCGGCAAG CGCACCTCTT CGAAAGCTGG TAGGGAAGGG CGTTTCGTCC TTGCCGCCAG CAGCACCCTC ATGTTCGCCA TCGCCAGCAT CAACGCGGCC ATGGCGGCAC CTACCGGTGC CCAGTTCAAC CCCAACGAGA TCAAGATCAG CCAGCAGGGC AAGACCACGC TGATCGACCA GAGCACCCAG CGCGCGATCA TCAACTGGAA GGGCTTCGAC GTCTCCGCCG ACGAGGCGGT GCGCTTCAAC CAGCCCGGTG TGACCTCGTC GACCCTGAAC CGGGTCACCG CAGGCCAGGA AAGCGTGATC GCCGGGCGCA TCTCCGCGCC CGGCCAGGTG ATCATCTACA ACTCCAACGG CGTGGTCTTC AGCGGCTCGG CCAAGGTAGA CGTGGGCTCC CTGATCACCA CCACGGCGAA CATCAGCGAC GAACACTTCC GCCAGGGCAA GCTGATCTTC GACCAGCCCG GAAACCCCGA CGCGCGGATC GTCAACGACG GCAGCATCAG CGTCGCGGAG AAAGGCCTGG CGGCCTTCGT CGCGCCGTCC GTGGCCAACA ACGGCGTGAT CAACGCCCGC CTCGGCACCG TGGCGATGGC CGCCGGCAAT GCCGCGACCA TCGACCTCTA CGGCGATGGC CTGGTGTCGA TCGCCGTGAC CGACCCGGTT ACCCGCAAGC CGCAGGATGC CCAGGCGCTG GTCAGCAACG GCGGCGCGAT CCAGGCCGAC GGCGGTAGCG TGCTGATCAC CGCCGAGCAG GCTTCCCGGG TGGTCGACAA CGCGGTCAAC CTGTCCGGCG TGATCCTTGC CCGCGGCACC GAGGTGCGCG AGGGCAGCGT GGCGCTGGTA AGCAAGTCCG GGGACATCCA GATCGCCGGC AAGATCGACG TCAGCGGTCC GAAGAACGGT GGCGACGTGC TGGTCAGCGG GCAGCAGGTG GCCCTGGCGA GCACCGCCAG CATCGACGCC CGCGGCGCCG CGCAGGGCGG CAGCGTGCGC ATCGGCGGCG ACTTCCAGGG CCGCGGCGAG CTGCCACGAG CGAAGAACGC TACGCTGGCC AAGGGCGCCA GCATCGACGT CTCGGCTACC GGCAAGGGCA ATGGCGGCCT GGCGGTGGTC TGGTCCGACG GCAATACCCG CATGGACGGG CGGATCCTCG CGCGCGGCGG CGCCCAGGGC GGCAACGGCG GCCTGGTGGA GACCTCCGGC AAGGTCAACC TGAGCATCGC CGACAGCGCC TACGTCAGCG TCGCCGCACC CTACGGCAAC GGTGGCACCT GGCTGCTCGA CCCTACCACC CTGCGCATCG TCGCCTCCGG CGGCACCTCA GGTTCGGTGG GGGGCGCCAA CGGCGCCAGC GGCGATGCGA CGGTGAATGC CTCGGTGGTC ACCGGGGCGC TGGCAGGCGG CAAGGTGACC CTCAGCGCCA GCGACCGGCT GTCGGTGGAA GCGCCGCTGA TCACCAGCAA CCTGGGCGGC GCCAGTCGCG GCCTGGAACT GATCGCCACC GGACCTGCCG GTGCGGTGGA TATCTCTGCG CCGATCCTGT TCCGCAACGG CAGCCTGGCA ATCCGCGCCG GCGGCAACAT CAACTTCCTC AGCGGCGGCA CGCCGCAGAC CAGCGGCATC GTCGACCTGG GTAGCGGCAC CCTGTGGATG CAGACCAGCA CCGCCGGCAA GATCAGCCAG CAGGCCGGTA CCGCGCTGAT CGCCGCCAAC CTCGCCGGCC GCGCCGGTAG CATCGACCTG GCTTCCTGGG ACAACTACGC CGGCAACCTG GCGCTGCAGA CCTTCAACGG TACGCTCAAG TACCGGCAGA GCAACGCCAC CGGCGTGACC ACGAGCGGCA CGGTGTTCGA TCCGTTCATC AACCAGAGCA TGACCGGCAC GGCGCAGAAC ATCGTCTCCA GCGTCGGCAC GCGGATTCTC GAGGCCAACA GCGTCGGCAC CACCGGCAAC TACACGCTGA CCGCCGACGG CAACAGCGAG TTCGACCGCC TGGTGTTCAC CGCGCTGCCC TATCGGCGGG TCAGCGGTTC CGCCAGTTTC CCGACCAACG ACTCGTCGGA CTACCTGGTG ACCAACCTGC GCTACCAGGT CAACGGCAGC AACGTCACCG CCACCCCGAA CGGCGGTGCG CCCAGCGGGT TCACCGTCGC CGCCGGCAAC GGCAGCGTCA CCACCTGGAC CGGAAACTGG GGCACCAGTT GGGGCGTCAA GGGCTTCGGC GGCGTGATCG GCGTGACCGA CGAACTGCAG TACGACGTCG GCACCGGCCT GACCGAGGAA CTGATCTTCG GCCTCGGCGG CAAGACCAGC CGCGTCGATA CTCGCCTGGA CCTGTTCATG CGCGAGGGAG CGTTCAACAG CTTCGCCGAG CGCGCCCAGG TGGAGATGTT CAAGACCACC ACCACTGCCG GCGACATCCT TTCCCGCCAG CAGACCGCCA CCCTGACCGC CAATGACGCT ACCCGCGTCT ACGGTGATGT GAATCCGACT CTGACGGCCA CGATGTCCGG CATCAACGCC ATCGACGCCT ACGTCAACAG CCAGTTCAAC GACCTCTACC AGGCGACCGC CAGCACCACG GCGACCCAGG CGTCGAACGT CGGGCAGTAC GCGATCACCG GTAACGCCAA TGGCAGCGAG TATTTCAGCC AGCGTTACCA ACTGGTGCGC CAGGACGGCA AGCTGACCGT CACGCCGGCG CAATTGATCG TCAGCGCCGA CGCCAAGACC AAGGTCTATG GCGACGCCGA TCCGACCCTC ACCTACCAGG TCAGTGGCCT GAAGAACAGC GATACCGCCG CCGGCGTGCT GAGCGGCAAC CTCGGCCGGG TGGCCGGGGA GAACGTCGGC AACTACGGGA TACTTCAGGG CGGGCTGGGC CTCAACACGG CCAATTACAC CCTCAGCTAC GTCGGCAACG ACCTGCGCAT CACTCCGGCG CAACTGAACG TGATCGCCGA TGCCAAGACC AAGGTCTATG GCGACCTCGA TCCGGCGCTG ACCTATCAGG TCTCCGGTCT CAAGCGCGGC GATACCGCCG GTGCCGTCCT CAACGGCGGC AGCCTGAGCC GCGTGGCTGG CGAGAACGTC GGCGTGTACG GCATCAACCA GGGTGGACTG GGCCTGGTCA GCAGCAATTA CACCCTGAAC TACCAGGGCA ATAACCTGAC CATCACCAAG GCACTGCTGA ATGTGATCGC CGATGCCAAG ACCAAGGTCT ATGGCGATGC CGATCCGAGC CTGACCTACC AAGTCAGTGG CCTGAAGAAC GGCGATACCG CTGGCGCGGT GCTTAACGGT GGCAGCCTGA GTCGCGTGGC TGGCGAGAAC GTGGGTGTGT ATGGCATCAA CCAGGGCGGC CTGGGTCTGG TCAGCGCGAA CTACGACCTG AGCTACCAGG GCAATAACCT GACCATCACC AAGGCGCTGC TGAATGTGAT CGCCGATGCC AAGACCAAGG TCTACGGCGA CGCCGACCCG AGCCTGACCT ACCAGGTCAG CGGCCTGAAG AATGGCGATA CCGCTGGCGC GGTGCTCAAT GGCGGCGGCC TGGTTCGTGT CTCCGGCGAA AACGTAGGCA ACTATGCGAT TCAGCAGGGT GGCCTGGGTC TGGTCAGCGG TAACTATGAC CTGGCTTACC AGGGCAACAA CCTGACCATC ACCAAGGCAC TGCTGAATGT GATCGCCGAT GCCAAGACCA AGGTCTACGG CGATGCCGAC CCGAGCCTGA CTTACCAGGT CAGCGGCCTG AAGAACGGCG ACACCGCCGG TGCCGTGCTC AACGGTGGCA GCCTGAGCCG CGTGGCTGGC GAGAATGTCG GCGTGTACGG CATCAACCAG GGTGGACTGG GCCTGGTCAG CGCGAACTAC GACCTGAGCT ACCAGGGCAA TAACCTGACC ATCACCAAGG CGCTGCTGAA TGTGATCGCC GATGCCAAGA CCAAGGTCTA TGGCGACGCC GATCCGGCAC TGACCTACCA GGTTTCCGGG CTGAAGAACG GCGATACCGC CGGTGCCGTG CTCAACGGCG GCAGCCTGAG CCGCGTGGCT GGCGAGAACG TCGGCGTGTA CGGCATCAAC CAGGGTGGAC TGGGCCTGGT CAGCGCGAAC TACGACCTGA GCTACCAAGG CAACAACCTG ACCATCACCA AGGCGCTGCT GAATGTGATC GCCGATGCCA AGACCAAGGT CTACGGTGAC GCCGACCCGA GCCTGACCTA CCAGGTCAGC GGCCTGAAGA ACGGTGACAG CGCCGGTTCG ATCCTGACCG GCGGGCTGAA CCGCGCCGCA GGCGAGAACG TGGGTGTGTA TGGCATCAAT CAGGGCGACC TGGCATTGAA TAGCGGCAAC TACGATCTGA GCTACCAGGG CAATAACCTG ACCATTACCA AGGCGCTGCT GAATGTGATC GCCGACGGCA AGACCAAGGT CTATGGCGAT GCCGATCCGA GCCTGACCTA TCAGGTCAGC GGCCTGAAGA ACGGCGACAC CGCCGGTGCC GTGCTCAACG GCGGCAGCCT GAGCCGCGTG GCTGGCGAGA ATGTCGGCGT GTACGGCATC AACCAGGGTG GACTGGGCCT GGTCAGCAGC AATTACACCC TGAACTATCA GGGTAATAAC CTGACCATCA CCAAGGCGCT GCTGAATGTG ATCGCCGATG CCAAGACCAA GGTCTATGGC GACGCCGACC CGAGCCTGAC CTACCAGGTC AGCGGCCTGA AGAACGGCGA CACCGCCGGT GCCGTGCTCA ACGGCGGCAG CCTGAGCCGC GTGGCTGGCG AGAATGTCGG CGTGTACGGC ATCAACCAGG GCGACCTGGC ATTGAACAGC GGTAACTACG ACCTGAGCTA CCAGGGCAAT AACCTGACCA TCACCAAGGC GCTGCTGAAT GTGATCGCCG ACGCCAAGAC CAAGGTCTAT GGCGATGCCG ATCCGGCACT GACCTACCAG GTTTCCGGGC TGAAGAACGG CGATACCGCT GGCGCGGTGC TCAATGGCGG CGGCCTGGTT CGTGTCTCCG GCGAAAACGT AGGCAACTAT GCGATTCAGC AGGGTGGCCT GGGTCTGGTC AGCGGTAACT ATGACCTGGC TTACCAGGGC AACAACCTGA CCATCACCAA GGCACTGCTG AATGTGATCG CCGACGCCAA GACCAAGGTC TACGGCGATG CCGATCCGAG CCTGACCTAC CAGGTCAGCG GCCTGAAGAA CGGTGACAGC GCCGGCTCGA TCCTGACCGG CGGGCTGAAC CGCGACGCAG GCGAGAACGT GGGTGTGTAT GGCATCAACC AGGGCGGCCT GGTGCTGACC AGTGGCAACT ATGACCTAGC CTACCAGGGT AATGACCTGA CCATCACCAA GGCGCTGCTC AACGTATTCG CCGATGCCAA GAGCAAGCAG GTCGGCACCG CCGACCCGGC GCTGACCTAT CAGGTTTCCG GCCTGAAGAA TGGCGATAGC GCCGGTCAGG TGCTCGCCGG CGGGCTCGGT CGGGTGGGCG GCGAAGCCGT AGGCCAGTAC GACATCCTCC AGGGTGGGCT TGCCCTCACC AGCGGCAACT ACCAGCTCAA CTACCAGGGC AACCTGCTGA GCATCCTGCC GCTGCCGGTC ACGCCGGGCG ACCTGGGGCA ACTGGCAGCG CTCTCCGACT TGCGCGAACT GCAGAAGGGG CGCGATCCGG ATACCCCCGG GGATGCGGTC TACCGCACCA CCACGCTGGA AAACCCGTTC CTCGAAAACC CGTTCCTGCG CGCCTACGCT CTGGGTATGG ACGTCAGCGA TCCGAACCTG CTGCCGGCTA CCGCCGCGGG GCCGGCAGAG GACGCCAGCG CCAAGCGGGT GGGGCAGTTC ACCGATCGTC CGCTCAGGGC AGAGGCCGAG AGTGGGGCGG GTTGCTCGAA CCAGAGCTAC CTGGCCGACT ACTGGAGCTG CTTCAACAAG CCTCTGAATT TCTAA
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Protein sequence | MVRPDSQRGK RTSSKAGREG RFVLAASSTL MFAIASINAA MAAPTGAQFN PNEIKISQQG KTTLIDQSTQ RAIINWKGFD VSADEAVRFN QPGVTSSTLN RVTAGQESVI AGRISAPGQV IIYNSNGVVF SGSAKVDVGS LITTTANISD EHFRQGKLIF DQPGNPDARI VNDGSISVAE KGLAAFVAPS VANNGVINAR LGTVAMAAGN AATIDLYGDG LVSIAVTDPV TRKPQDAQAL VSNGGAIQAD GGSVLITAEQ ASRVVDNAVN LSGVILARGT EVREGSVALV SKSGDIQIAG KIDVSGPKNG GDVLVSGQQV ALASTASIDA RGAAQGGSVR IGGDFQGRGE LPRAKNATLA KGASIDVSAT GKGNGGLAVV WSDGNTRMDG RILARGGAQG GNGGLVETSG KVNLSIADSA YVSVAAPYGN GGTWLLDPTT LRIVASGGTS GSVGGANGAS GDATVNASVV TGALAGGKVT LSASDRLSVE APLITSNLGG ASRGLELIAT GPAGAVDISA PILFRNGSLA IRAGGNINFL SGGTPQTSGI VDLGSGTLWM QTSTAGKISQ QAGTALIAAN LAGRAGSIDL ASWDNYAGNL ALQTFNGTLK YRQSNATGVT TSGTVFDPFI NQSMTGTAQN IVSSVGTRIL EANSVGTTGN YTLTADGNSE FDRLVFTALP YRRVSGSASF PTNDSSDYLV TNLRYQVNGS NVTATPNGGA PSGFTVAAGN GSVTTWTGNW GTSWGVKGFG GVIGVTDELQ YDVGTGLTEE LIFGLGGKTS RVDTRLDLFM REGAFNSFAE RAQVEMFKTT TTAGDILSRQ QTATLTANDA TRVYGDVNPT LTATMSGINA IDAYVNSQFN DLYQATASTT ATQASNVGQY AITGNANGSE YFSQRYQLVR QDGKLTVTPA QLIVSADAKT KVYGDADPTL TYQVSGLKNS DTAAGVLSGN LGRVAGENVG NYGILQGGLG LNTANYTLSY VGNDLRITPA QLNVIADAKT KVYGDLDPAL TYQVSGLKRG DTAGAVLNGG SLSRVAGENV GVYGINQGGL GLVSSNYTLN YQGNNLTITK ALLNVIADAK TKVYGDADPS LTYQVSGLKN GDTAGAVLNG GSLSRVAGEN VGVYGINQGG LGLVSANYDL SYQGNNLTIT KALLNVIADA KTKVYGDADP SLTYQVSGLK NGDTAGAVLN GGGLVRVSGE NVGNYAIQQG GLGLVSGNYD LAYQGNNLTI TKALLNVIAD AKTKVYGDAD PSLTYQVSGL KNGDTAGAVL NGGSLSRVAG ENVGVYGINQ GGLGLVSANY DLSYQGNNLT ITKALLNVIA DAKTKVYGDA DPALTYQVSG LKNGDTAGAV LNGGSLSRVA GENVGVYGIN QGGLGLVSAN YDLSYQGNNL TITKALLNVI ADAKTKVYGD ADPSLTYQVS GLKNGDSAGS ILTGGLNRAA GENVGVYGIN QGDLALNSGN YDLSYQGNNL TITKALLNVI ADGKTKVYGD ADPSLTYQVS GLKNGDTAGA VLNGGSLSRV AGENVGVYGI NQGGLGLVSS NYTLNYQGNN LTITKALLNV IADAKTKVYG DADPSLTYQV SGLKNGDTAG AVLNGGSLSR VAGENVGVYG INQGDLALNS GNYDLSYQGN NLTITKALLN VIADAKTKVY GDADPALTYQ VSGLKNGDTA GAVLNGGGLV RVSGENVGNY AIQQGGLGLV SGNYDLAYQG NNLTITKALL NVIADAKTKV YGDADPSLTY QVSGLKNGDS AGSILTGGLN RDAGENVGVY GINQGGLVLT SGNYDLAYQG NDLTITKALL NVFADAKSKQ VGTADPALTY QVSGLKNGDS AGQVLAGGLG RVGGEAVGQY DILQGGLALT SGNYQLNYQG NLLSILPLPV TPGDLGQLAA LSDLRELQKG RDPDTPGDAV YRTTTLENPF LENPFLRAYA LGMDVSDPNL LPATAAGPAE DASAKRVGQF TDRPLRAEAE SGAGCSNQSY LADYWSCFNK PLNF
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