Gene PA14_60890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_60890 
SymbolglyA 
ID4384576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5433207 
End bp5434460 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID639327513 
Productserine hydroxymethyltransferase 
Protein accessionYP_793061 
Protein GI116052744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCC GTGATTTGAC CCTCGCCCGC TACGATGCCG AACTCTTTGC CGCGATGGAG 
CAGGAAGCCC AGCGCCAGGA AGAGCACATC GAGCTGATCG CCTCCGAGAA CTACACCAGC
CCGGCGGTGA TGGAAGCCCA GGGTTCGGTG CTGACCAACA AGTACGCCGA AGGTTATCCG
CACAAGCGCT ACTACGGCGG CTGCGAGTAC GTCGATATCG TCGAGCAACT GGCCATCGAC
CGCGCCAAGC AACTGTTCGG CGCCGATTAC GCCAACGTCC AGCCGCACGC CGGCTCCCAG
GCCAACGCCG CGGTCTACCT GGCCCTGCTG TCGGCCGGCG ACACCATCCT CGGCATGAGC
CTGGCCCACG GCGGCCACCT GACCCACGGC GCCAGCGTCT CCTCCTCCGG CAAGCTGTAC
AACGCCGTGC AGTACGGCAT CGACGCCAAT GGCCTGATCG ACTACGACGA AGTCGAGCGC
CTGGCCGTGG AGCACAAGCC GAAGATGATC GTCGCCGGCT TCTCCGCCTA TTCCCAGGTC
CTCGATTTCG CCCGCTTCCG CGCCATCGCC GACAAGGTCG GCGCCTACCT GTTCGTCGAC
ATGGCCCACG TCGCCGGCCT GGTCGCCGCT GGCGTCTACC CGAACCCGGT GCCGTTCGCC
GACGTGGTCA CCACCACCAC CCACAAGACC CTGCGCGGTC CGCGCGGTGG CCTGATCCTG
GCGCGCGCCA ACGAGGAGAT CGAGAAGAAG CTCAACTCCG CGGTATTCCC CGGCGCCCAG
GGCGGTCCGC TGGAGCACGT GATCGCGGCC AAGGCGGTGT GCTTCAAGGA AGCCCTGCAG
CCGGAGTTCA AGACCTACCA GCAGCAGGTC CTGAAGAACG CCCAGACCAT GGCCCAGGTC
TTCCTCGACC GCGGTTTCGA CGTGGTTTCC GGCGGCACCC AGAACCACCT GTTCCTGCTC
TCCCTGATCA AGCAGGACAT CACCGGCAAA GACGCCGACG CCGCCCTCGG CCGCGCGTTC
ATCACCGTGA ACAAGAACTC GGTCCCGAAC GACCCGCGCT CGCCGTTCGT CACCTCCGGC
CTGCGCATCG GTACCCCGGC CGTGACCACC CGCGGCTTCA AGGAAGCCGA GTGCCGCGAG
CTGGCCGGCT GGATCTGCGA CATCCTCGAG AACATGGGCG ACGAGTCCGT GGTCAACGGC
GTACGCGAGA AGGTCAAGGC GATCTGCGCC AAGTTCCCGG TCTACGGCAA CTAA
 
Protein sequence
MFSRDLTLAR YDAELFAAME QEAQRQEEHI ELIASENYTS PAVMEAQGSV LTNKYAEGYP 
HKRYYGGCEY VDIVEQLAID RAKQLFGADY ANVQPHAGSQ ANAAVYLALL SAGDTILGMS
LAHGGHLTHG ASVSSSGKLY NAVQYGIDAN GLIDYDEVER LAVEHKPKMI VAGFSAYSQV
LDFARFRAIA DKVGAYLFVD MAHVAGLVAA GVYPNPVPFA DVVTTTTHKT LRGPRGGLIL
ARANEEIEKK LNSAVFPGAQ GGPLEHVIAA KAVCFKEALQ PEFKTYQQQV LKNAQTMAQV
FLDRGFDVVS GGTQNHLFLL SLIKQDITGK DADAALGRAF ITVNKNSVPN DPRSPFVTSG
LRIGTPAVTT RGFKEAECRE LAGWICDILE NMGDESVVNG VREKVKAICA KFPVYGN