Gene PA14_60790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_60790 
Symbol 
ID4384568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5418186 
End bp5418872 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID639327505 
ProductABC transporter ATP-binding protein 
Protein accessionYP_793053 
Protein GI116052736 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones100 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCCC TGCAGGGGAT CGGCAAGGGC TACCTCCTGG GGGGGCAGCC GCTGCAGATA 
CTGAAAGACG TCTGCCTGGA CATCTTTCCC GGAGAAAGCT GCGCGATCGT CGGCGCGTCG
GGCTCGGGCA AGAGCACCCT GCTGAATATT CTCGGCCTGC TCGACCGCCC GGACAGCGGC
GCCTACCGCT TCGCCGAGCA CGACATCTTC AGCGTCGACG GGGACCGACT GGCGGCGATC
CGCAACCGCC TGATCGGCTT CGTCTTCCAG AGCTTCAACC TGTTGCCGCG GCTGAACGCG
CTGGACAACG TCGCGCTGCC CCTGAGCTAT CGAGGGATGC CGCGCCGCGA GGCACTGGAG
CGGGCCGAGG CGATGCTCGC CCGGGTCGGC CTGGCCGAGC GCGCCGGCCA TCGTCCGGCG
GACCTCTCCG GCGGCCAGCG GCAGCGCGTC GCCATCGCTC GCGCGCTGGT CGGCGAGCCG
GCGCTGATCC TCGCCGACGA ACCAACCGGC AACCTCGACG CGAGCACCGC GAAAGAAGTG
CTGGAGCTGC TCCTCACCCT CAACCGCGAG CGCCAGGTGA CCCTGGTGGT GGTCACCCAT
GATCCCAGCC TGGCCGCCCG TCTCGGGCGC CAACTGACAG TGCGGCATGG CGAGGTGCAC
GAGGACCTGG CGGAGGCCTG CCGGTGA
 
Protein sequence
MISLQGIGKG YLLGGQPLQI LKDVCLDIFP GESCAIVGAS GSGKSTLLNI LGLLDRPDSG 
AYRFAEHDIF SVDGDRLAAI RNRLIGFVFQ SFNLLPRLNA LDNVALPLSY RGMPRREALE
RAEAMLARVG LAERAGHRPA DLSGGQRQRV AIARALVGEP ALILADEPTG NLDASTAKEV
LELLLTLNRE RQVTLVVVTH DPSLAARLGR QLTVRHGEVH EDLAEACR